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50 publications found

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Group #1

TitleAuthors (identified)Published InIdentifier(s)TopicPublished DateMatch?
The microRNA network is altered in anterior cingulate cortex of patients with unipolar and bipolar depression[1]Joshua A Azevedo, [2]Bradley S Carter, [3]Fan Meng, [4]David L Turner, [5]Manhong Dai, [6]Alan F Schatzberg, [7]Jack D Barchas, [8]Edward G Jones, [9]William E Bunney, [10]Richard M Myers, [11]Huda Akil, [12]Stanley J Watson, [13]Robert C Thompson [Full author list]Journal of Psychiatric Research [missing]DOI: 10.1016/J.JPSYCHIRES.2016.07.012 [ORCID]
PubMed: 27468165 [ORCID]
microRNA [missing]; bipolar depression [missing]2016-07-18
Using Interactive Data Visualizations for Exploratory Analysis in Undergraduate Genomics Coursework: Field Study Findings and Guidelines[1]Barbara Mirel, [2]Anuj Kumar, [3]Paige Nong, [4]Gang Su, [5]Fan Meng [Full author list]Journal of Science Education and Technology [missing]DOI: 10.1007/S10956-015-9579-Z [ORCID]
PubMed: 26877625 [ORCID]
genomics [missing]; visualization [missing]; data visualization [missing]2015-09-04
Massively parallel enzyme kinetics reveals the substrate recognition landscape of the metalloprotease ADAMTS13.[1]Colin Kretz, [2]Manhong Dai, [3]Onuralp Soylemez, [4]Andrew Yee, [5]Karl C Desch, [6]David Siemieniak, [7]Kärt Tomberg, [8]Fyodor Kondrashov, [9]Fan Meng, [10]David Ginsburg [Full author list]Proceedings of the National Academy of Sciences of the United States of America [missing]DOI: 10.1073/PNAS.1511328112 [ORCID]
PubMed: 26170332 [ORCID]
2015-07-13
G protein-linked signaling pathways in bipolar and major depressive disorders[1]Hiroaki Tomita, [2]Mary E Ziegler, [3]Helen B Kim, [4]Simon J. Evans, [5]Prabhakara Choudary, [6]Jun Z Li, [7]Fan Meng, [8]Manhong Dai, [9]Richard M Myers, [10]Charles R Neal, [11]Terry Speed, [12]Jack D Barchas, [13]Alan F Schatzberg, [14]Stanley J Watson, [15]Huda Akil, [16]Edward G Jones, [17]William E Bunney, [18]Marquis P Vawter [Full author list]Frontiers in Genetics [missing]DOI: 10.3389/FGENE.2013.00297 [ORCID]
PubMed: 24391664 [ORCID]
2013-12-23
Genetic relationship between five psychiatric disorders estimated from genome-wide SNPs[2]S Hong Lee, [3]Stephan Ripke, [4]Benjamin M. Neale, [5]Stephen Faraone, [6]Shaun M Purcell, [7]Roy H. Perlis, [8]Bryan Mowry, [9]Anita Thapar, [10]Michael Goddard, ..., [221]Sandra Meier, [222]Ingrid Melle, [223]Fan Meng, [224]Jobst Meyer, [225]Christel M Middeldorp, ... [Full author list]Nature Genetics [missing]DOI: 10.1038/NG.2711 [ORCID]
PubMed: 23933821 [ORCID]
mental disorder [missing]; single-nucleotide polymorphism [missing]2013-09-01
Circadian patterns of gene expression in the human brain and disruption in major depressive disorder[1]Jun Z Li, [2]Blynn G Bunney, [3]Fan Meng, [4]Megan H Hagenauer, [5]David M Walsh, [6]Marquis P Vawter, [7]Simon J. Evans, [8]Prabhakara Choudary, [9]Preston Cartagena, [10]Jack D Barchas, [11]Alan F Schatzberg, [12]Edward G Jones, [13]Richard M Myers, [14]Stanley J Watson, [15]Huda Akil, [16]William E Bunney [Full author list]Proceedings of the National Academy of Sciences of the United States of America [missing]DOI: 10.1073/PNAS.1305814110 [ORCID]
PubMed: 23671070 [ORCID]
major depressive disorder [missing]; circadian rhythm [missing]2013-05-13
Studying PubMed usages in the field for complex problem solving: Implications for tool design[1]Barbara Mirel, [2]Jean Song, [3]Jennifer Steiner Tonks, [4]Fan Meng, [5]Weijian Xuan, [6]Rafiqa Ameziane [Full author list]Journal of the Association for Information Science and Technology [missing]DOI: 10.1002/ASI.22796 [ORCID]
PubMed: 24376375 [ORCID]
information system [missing]; PubMed [missing]; human–computer interaction [missing]; problem solving [missing]2013-05-01
Glucocorticoid treatment of astrocytes results in temporally dynamic transcriptome regulation and astrocyte-enriched mRNA changes in vitro[1]Bradley S Carter, [2]Fan Meng, [3]Robert C Thompson [Full author list]Physiological Genomics [missing]DOI: 10.1152/PHYSIOLGENOMICS.00097.2012 [ORCID]
PubMed: 23110767 [ORCID]
astrocyte [missing]2012-10-30
Integrated metabolome and transcriptome analysis of the NCI60 dataset[1]Gang Su, [2]Charles F. Burant, [3]Christopher W Beecher, [4]Brian D. Athey, [5]Fan Meng [Full author list]BMC Bioinformatics [missing]DOI: 10.1186/1471-2105-12-S1-S36 [ORCID]
PubMed: 21342567 [ORCID]
transcriptome [missing]2011-02-15
Cross-domain neurobiology data integration and exploration[1]Weijian Xuan, [2]Manhong Dai, [3]Josh Buckner, [4]Barbara Mirel, [5]Jean Song, [6]Brian D. Athey, [7]Stanley J Watson, [8]Fan Meng [Full author list]BMC Genomics [missing]DOI: 10.1186/1471-2164-11-S3-S6 [ORCID]
PubMed: 21143788 [ORCID]
data integration [missing]2010-12-01
GLay: community structure analysis of biological networks[1]Gang Su, [2]Allan Kuchinsky, [3]John "Scooter" Morris, [4]David J States, [5]Fan Meng [Full author list]Bioinformatics [missing]DOI: 10.1093/BIOINFORMATICS/BTQ596 [ORCID]
PubMed: 21123224 [ORCID]
2010-12-01
GSearcher: agile attribute querying for biological networks[1]Gang Su, [2]Brian D. Athey, [3]Fan Meng [Full author list]Bioinformatics [missing]DOI: 10.1093/BIOINFORMATICS/BTQ597 [ORCID]
PubMed: 21088028 [ORCID]
2010-11-18
The gputools package enables GPU computing in R[1]Joshua Buckner, [2]Justin Wilson, [3]Mark Seligman, [4]Brian D. Athey, [5]Stanley Watson, [6]Fan Meng [Full author list]Bioinformatics [missing]DOI: 10.1093/BIOINFORMATICS/BTP608 [ORCID]
PubMed: 19850754 [ORCID]
R package [missing]2009-10-22
Genome-wide association and meta-analysis of bipolar disorder in individuals of European ancestry[1]Laura J. Scott, [2]Pierandrea Muglia, [3]Xiangyang Q. Kong, [4]Weihua Guan, [5]Matthew Flickinger, [6]Ruchi Upmanyu, [7]Federica Tozzi, [8]Jun Z. Li, [9]Margit Burmeister, [10]Devin Absher, [11]Robert C. Thompson, [12]Clyde Francks, [13]Fan Meng, [14]Athos Antoniades, [15]Audrey M. Southwick, ... [Full author list]Proceedings of the National Academy of Sciences of the United States of America [missing]DOI: 10.1073/PNAS.0813386106 [ORCID]
PubMed: 19416921 [ORCID]
bipolar disorder [missing]; meta-analysis [missing]; genome-wide association study [missing]2009-05-05
Open Biomedical Ontology-based Medline exploration[1]Weijian Xuan, [2]Manhong Dai, [3]Barbara Mirel, [4]Jean Song, [5]Brian D. Athey, [6]Stanley J Watson, [7]Fan Meng [Full author list]BMC Bioinformatics [missing]DOI: 10.1186/1471-2105-10-S5-S6 [ORCID]
PubMed: 19426463 [ORCID]
ontology [missing]; MEDLINE [missing]2009-01-01
Gene expression profiling of neurochemically defined regions of the human brain by in situ hybridization-guided laser capture microdissection[1]René Bernard, [2]Ilan A Kerman, [3]Fan Meng, [4]Simon J. Evans, [5]Irmgard Amrein, [6]Edward G Jones, [7]William E Bunney, [8]Huda Akil, [9]Stanley J Watson, [10]Robert C Thompson [Full author list]Journal of Neuroscience Methods [missing]DOI: 10.1016/J.JNEUMETH.2008.11.012 [ORCID]
PubMed: 19070632 [ORCID]
microdissection [missing]2008-11-25
A diagram editor for efficient biomedical knowledge capture and integration[1]Bohua Yu, [2]Elvis Jakupovic, [3]Justin Wilson, [4]Manhong Dai, [5]Weijian Xuan, [6]Barbara Mirel, [7]Brian Athey, [8]Stanley Watson, [9]Fan Meng [Full author list]Summit on translational bioinformatics [missing]PubMed: 21347131 [ORCID]
2008-03-01
Sample matching by inferred agonal stress in gene expression analyses of the brain[1]Jun Z Li, [2]Fan Meng, [3]Larisa Tsavaler, [4]Simon J. Evans, [5]Prabhakara Choudary, [6]Hiroaki Tomita, [7]Marquis P Vawter, [8]David Walsh, [9]Vida Shokoohi, [10]Tisha Chung, [11]William E Bunney, [12]Edward G Jones, [13]Huda Akil, [14]Stanley J Watson, [15]Richard M Myers [Full author list]BMC Genomics [missing]DOI: 10.1186/1471-2164-8-336 [ORCID]
PubMed: 17892578 [ORCID]
2007-09-24
Regulation of tryptophan hydroxylase-2 gene expression by a bipartite RE-1 silencer of transcription/neuron restrictive silencing factor (REST/NRSF) binding motif[1]Paresh D Patel, [2]Daniel A Bochar, [3]David L Turner, [4]Fan Meng, [5]Helena M Mueller, [6]Crystal G Pontrello [Full author list]Journal of Biological Chemistry [missing]DOI: 10.1074/JBC.M705120200 [ORCID]
PubMed: 17613521 [ORCID]
gene silencing [missing]2007-07-05
Web-based GeneChip analysis system for large-scale collaborative projects[1]Manhong Dai, [2]Pinglang Wang, [3]Elvis Jakupovic, [4]Stanley J Watson, [5]Fan Meng [Full author list]Bioinformatics [missing]DOI: 10.1093/BIOINFORMATICS/BTM297 [ORCID]
PubMed: 17586830 [ORCID]
collaboration [missing]2007-06-22
Application of microarray technology in primate behavioral neuroscience research[1]Adriaan M Karssen, [2]Jun Z Li, [3]Song Her, [4]Paresh D Patel, [5]Fan Meng, [6]Simon J. Evans, [7]Marquis P Vawter, [8]Hiroaki Tomita, [9]Prabhakara Choudary, [10]William E Bunney, [11]Edward G Jones, [12]Stanley J Watson, [13]Huda Akil, [14]Richard M Myers, [15]Alan F Schatzberg, [16]David M Lyons [Full author list]Methods [missing]DOI: 10.1016/J.YMETH.2005.09.017 [ORCID]
PubMed: 16469505 [ORCID]
2006-03-01
Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data[1]Manhong Dai, [2]Pinglang Wang, [3]Andrew D. Boyd, [4]Georgi Kostov, [5]Brian D. Athey, [6]Edward G Jones, [7]William E Bunney, [8]Richard M Myers, [11]Stanley J Watson, [12]Fan Meng, [8-Q7327555]Richard M. Myers, [9]Terry Speed, [10]Huda Akil [Full author list]Nucleic Acids Research [missing]DOI: 10.1093/NAR/GNI179 [ORCID]
PubMed: 16284200 [ORCID]
2005-11-10

Group #2

TitleAuthors (identified)Published InIdentifier(s)TopicPublished DateMatch?
Human Endogenous Retrovirus Type K (HERV-K) Particles Package and Transmit HERV-K-Related Sequences[1]Rafael Contreras-Galindo, [2]Mark H Kaplan, [3]Derek Dube, [4]Marta J Gonzalez-Hernandez, [5]Susana Chan, [6]Fan Meng, [7]Manhong Dai, [8]Gil Omenn, [9]Scott D Gitlin, [10]David M Markovitz [Full author list]Journal of Virology [missing]DOI: 10.1128/JVI.00544-15 [ORCID]
PubMed: 25926654 [ORCID]
2015-04-29
Expansion of a novel endogenous retrovirus throughout the pericentromeres of modern humans[1]Joseph Zahn, [2]Mark H Kaplan, [3]Sabrina Fischer, [4]Manhong Dai, [5]Fan Meng, [6]Anjan Kumar Saha, [7]Patrick Cervantes, [8]Susana M Chan, [9]Derek Dube, [10]Gil Omenn, [11]David M Markovitz, [12]Rafael Contreras-Galindo [Full author list]Genome Biology [missing]DOI: 10.1186/S13059-015-0641-1 [ORCID]
PubMed: 25886262 [ORCID]
2015-04-12
Regulation of the human endogenous retrovirus K (HML-2) transcriptome by the HIV-1 Tat protein[1]Marta J Gonzalez-Hernandez, [2]James D Cavalcoli, [3]Maureen Sartor, [4]Rafael Contreras-Galindo, [5]Fan Meng, [6]Manhong Dai, [7]Derek Dube, [8]Anjan K Saha, [9]Scott D Gitlin, [10]Gil Omenn, [11]Mark H Kaplan, [12]David M Markovitz [Full author list]Journal of Virology [missing]DOI: 10.1128/JVI.00556-14 [ORCID]
PubMed: 24872592 [ORCID]
transcriptome [missing]; Human endogenous retrovirus K [missing]2014-05-28
HIV infection reveals widespread expansion of novel centromeric human endogenous retroviruses[1]Rafael Contreras-Galindo, [2]Mark H Kaplan, [3]Shirley He, [4]Angie C Contreras-Galindo, [5]Marta J Gonzalez-Hernandez, [6]Ferdinand Kappes, [7]Derek Dube, [8]Susana M Chan, [9]Dan Robinson, [10]Fan Meng, [11]Manhong Dai, [12]Scott D Gitlin, [13]Arul M Chinnaiyan, [14]Gil Omenn, [15]David M Markovitz [Full author list]Genome Research [missing]DOI: 10.1101/GR.144303.112 [ORCID]
PubMed: 23657884 [ORCID]
2013-09-01
NGSQC: cross-platform quality analysis pipeline for deep sequencing data[1]Manhong Dai, [2]Robert C Thompson, [3]Christopher Maher, [4]Rafael Contreras-Galindo, [5]Mark H Kaplan, [6]David M Markovitz, [7]Gil Omenn, [8]Fan Meng [Full author list]BMC Genomics [missing]DOI: 10.1186/1471-2164-11-S4-S7 [ORCID]
PubMed: 21143816 [ORCID]
2010-12-02

Misc

TitleAuthors (identified)Published InIdentifier(s)TopicPublished DateMatch?
Dual-band polarization convertor based on electromagnetically induced transparency (EIT) effect in all-dielectric metamaterial[1]Lei Zhu, [2]Xin Zhao, [3]Feng Juan Miao, [4]Bablu K Ghosh, [5]Liang Dong, [6]Bai Rui Tao, [7]Fan Yi Meng, [8]Wei Nan Li [Full author list]Optics Express [missing]DOI: 10.1364/OE.27.012163 [ORCID]
PubMed: 31052760 [ORCID]
metamaterial [missing]2019-04-01
Spatio-temporal variations of PM2.5 concentrations and the evaluation of emission reduction measures during two red air pollution alerts in Beijing[1]Nianliang Cheng, [2]Dawei Zhang, [3]Yunting Li, [4]Xiaoming Xie, [5]Ziyue Chen, [6]Fan Meng, [7]Bingbo Gao, [8]Bin He [Full author list]Scientific Reports [missing]DOI: 10.1038/S41598-017-08895-X [ORCID]
PubMed: 28811594 [ORCID]
Beijing [missing]; air pollution [missing]; PM 2.5 [missing]2017-08-15
Calcium Channel Opening Rather than the Release of ATP Causes the Apoptosis of Osteoblasts Induced by Overloaded Mechanical Stimulation[1]Lu Liu, [2]Hui Li, [3]Ying Cui, [4]Ruixin Li, [5]Fan Meng, [6]Zi Ye, [7]Xizheng Zhang [Full author list]Cellular Physiology and Biochemistry [missing]DOI: 10.1159/000477592 [ORCID]
PubMed: 28578345 [ORCID]
osteoblast [missing]2017-06-05
Effects of dissolved oxygen concentration on photosynthetic bacteria wastewater treatment: Pollutants removal, cell growth and pigments production[1]Fan Meng, [2]Anqi Yang, [3]Guangming Zhang, [4]Hangyao Wang [Full author list]Bioresource Technology [missing]DOI: 10.1016/J.BIORTECH.2017.05.183 [ORCID]
PubMed: 28637167 [ORCID]
photosynthesis [missing]; cell growth [missing]; wastewater [missing]; wastewater treatment [missing]2017-06-01
Self-Association of Rafoxanide in Aqueous Media and Its Application in Preparing Amorphous Solid Dispersions[1]Fan Meng, [2]Tongzhou Liu, [3]Elizabeth Schneider, [4]Shehab Alzobaidi, [5]Marco Gil, [6]Feng Zhang [Full author list]Molecular Pharmaceutics [missing]DOI: 10.1021/ACS.MOLPHARMACEUT.7B00068 [ORCID]
PubMed: 28375620 [ORCID]
2017-04-17
Biochemical characterization and zinc binding group (ZBGs) inhibition studies on the catalytic domain of MMP7 (cdMMP7)[1]Fan Meng, [2]Hao Yang, [3]Colin Jack, [4]Huaqun Zhang, [5]Abraham Moller, [6]Devin Spivey, [7]Richard C Page, [8]David L Tierney, [9]Michael W Crowder [Full author list]Journal of Inorganic Biochemistry [missing]DOI: 10.1016/J.JINORGBIO.2016.10.005 [ORCID]
PubMed: 27755977 [ORCID]
2016-10-14
Learning With Label Proportions via NPSVM.[1]Zhiquan Qi, [2]Bo Wang, [3]Fan Meng, [4]Lingfeng Niu [Full author list]IEEE Transactions on Cybernetics [missing]DOI: 10.1109/TCYB.2016.2598749 [ORCID]
PubMed: 28113650 [ORCID]
2016-08-24
Deep transcriptomic profiling reveals the similarity between endothelial cells cultured under static and oscillatory shear stress conditions[1]Congzhen Qiao, [2]Fan Meng, [3]Inhwan Jang, [4]Hanjoong Jo, [5]Y Eugene Chen, [6]Jifeng Zhang [Full author list]Physiological Genomics [missing]DOI: 10.1152/PHYSIOLGENOMICS.00025.2016 [ORCID]
PubMed: 27449656 [ORCID]
endothelium [missing]; transcriptome [missing]; RNA sequencing [missing]2016-07-22
Biochemical and spectroscopic characterization of the catalytic domain of MMP16 (cdMMP16)[1]Fan Meng, [2]Hao Yang, [3]Mahesh Aitha, [4]Sam George, [5]David L. Tierney, [6]Michael W. Crowder [Full author list]Journal of Biological Inorganic Chemistry [missing]DOI: 10.1007/S00775-016-1362-Y [ORCID]
PubMed: 27229514 [ORCID]
protein processing [missing]; Matrix metallopeptidase 16 [missing]2016-07-01
An Intrinsically Disordered Motif Mediates Diverse Actions of Monomeric C-reactive Protein[1]Hai-Yun Li, [2]Jing Wang, [3]Fan Meng, [4]Zhe-Kun Jia, [5]Yang Su, [6]Qifeng Bai, [7]Ling-Ling Lv, [8]Fu-Rong Ma, [9]Lawrence A Potempa, [10]Yong-Bin Yan, [11]Shang-Rong Ji, [12]Yi Wu [Full author list]Journal of Biological Chemistry [missing]DOI: 10.1074/JBC.M115.695023 [ORCID]
PubMed: 26907682 [ORCID]
2016-02-23
Integrative Metabolic Signatures for Hepatic Radiation Injury[1]Irwin Jack Kurland, [2]Pilib Ó Broin, [3]Aaron Golden, [4]Gang Su, [5]Fan Meng, [6]Laibin Liu, [7]Robert Mohney, [8]Shilpa Kulkarni, [9]Chandan Guha [Full author list]PLOS One [missing]DOI: 10.1371/JOURNAL.PONE.0124795 [ORCID]
PubMed: 26046990 [ORCID]
2015-06-05
Qualitative and quantitative methods to determine miscibility in amorphous drug-polymer systems[1]Fan Meng, [2]Vivek Dave, [3]Harsh Chauhan [Full author list]European Journal of Pharmaceutical Sciences [missing]DOI: 10.1016/J.EJPS.2015.05.018 [ORCID]
PubMed: 26006307 [ORCID]
2015-05-22
Classification of solid dispersions: correlation to (i) stability and solubility (ii) preparation and characterization techniques[1]Fan Meng, [2]Urvi Gala, [3]Harsh Chauhan [Full author list]Drug Development and Industrial Pharmacy [missing]DOI: 10.3109/03639045.2015.1018274 [ORCID]
PubMed: 25853292 [ORCID]
2015-04-08
Complete perchlorate reduction using methane as the sole electron donor and carbon source[1]Yi-Hao Luo, [2]Ran Chen, [3]Li-Lian Wen, [4]Fan Meng, [5]Yin Zhang, [6]Chun-Yu Lai, [7]Bruce E. Rittmann, [8]He-Ping Zhao, [9]Ping Zheng [Full author list]Environmental Science & Technology [missing]DOI: 10.1021/ES504990M [ORCID]
PubMed: 25594559 [ORCID]
methane [missing]2015-02-02
Impact of experimental noise and annotation imprecision on data quality in microarray experiments[1]Andreas Scherer, [2]Manhong Dai, [3]Fan Meng [Full author list]Methods in Molecular Biology [missing]DOI: 10.1007/978-1-60327-337-4_10 [ORCID]
PubMed: 23385537 [ORCID]
data quality [missing]2013-01-01
Imatinib and bortezomib induce the expression and distribution of anaphase-promoting complex adaptor protein Cdh1 in blast crisis of chronic myeloid leukemia[1]Qiang Wang, [2]Hong Sheng Zhou, [3]Kai Kai Huang, [4]Xue Jie Jiang, [5]Fu Qun Wu, [6]Rui Cao, [7]Chang Xin Yin, [8]Li Bin Liao, [9]Zhong Xin Zheng, [10]Han He, [11]Rong Lin, [12]Zheng Shan Yi, [13]Dan Xu, [14]Mo Yang, [15]Fan Yi Meng [Full author list]International Journal of Oncology [missing]DOI: 10.3892/IJO.2011.1233 [ORCID]
PubMed: 22002244 [ORCID]
imatinib [missing]; chronic myeloid leukemia [missing]2011-10-13
Quantitative evaluation of two-factor analysis applied to hepatic perfusion study using contrast-enhanced ultrasound[1]Ji Zhang, [2]Mingyue Ding, [3]Fan Meng, [4]Xuming Zhang [Full author list]IEEE Transactions on Biomedical Engineering [missing]DOI: 10.1109/TBME.2011.2171038 [ORCID]
PubMed: 21990328 [ORCID]
2011-10-10

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NameDescriptionAuthored itemsIdentifiersEmployer(s)
Fan Mengresearcher5ORCID: 0000-0002-3419-7652
VIAF ID: 55820942
Fan Mengpoliticus0
Fan Mengperson, CBDB ID = 4104580
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