| Title | Authors (identified) | Published In | Identifier(s) | Topic | Published Date |
|---|
| Mechnetor: a web server for exploring protein mechanism and the functional context of genetic variants | [1]Juan Carlos González-Sánchez, [2]Mustafa F R Ibrahim, [3]Ivo C Leist, [4]Kyle R Weise, [5]Rob B Russell, [6]Robert B. Russell [Full author list] | Nucleic Acids Research [curation] | DOI: 10.1093/NAR/GKAB399
PubMed: 34076240 | web server [curation] | 2021-07-01 |
| CiliaCarta: An integrated and validated compendium of ciliary genes | [1]Teunis J. P. van Dam, [2]Julie Kennedy, [3]Robin van der Lee, [4]Erik de Vrieze, [5]Kirsten A Wunderlich, [6]Suzanne Rix, [7]Gerard W Dougherty, [8]Nils J Lambacher, [9]Chunmei Li, [10]Victor L Jensen, ..., [38]Rachel H Giles, [39]Radek Szklarczyk, [40]Robert B. Russell, [41]Rob B Russell, [42]Toby J. Gibson, ... [Full author list] | PLOS One [curation] | DOI: 10.1371/JOURNAL.PONE.0216705
PubMed: 31095607 | | 2019-05-16 |
| Insights into cancer severity from biomolecular interaction mechanisms | [1]Francesco Raimondi, [2]Gurdeep Singh, [3]Matthew J Betts, [4]Gordana Apic, [5]Ranka Vukotic, [6]Pietro Andreone, [7]Lincoln Stein, [8]Robert B. Russell [Full author list] | Scientific Reports [curation] | DOI: 10.1038/SREP34490
PubMed: 27698488 | | 2016-10-04 |
| Mutagenesis of N-terminal residues of feline foamy virus Gag reveals entirely distinct functions during capsid formation, particle assembly, Gag processing and budding | [1]Yang Liu, [2]Matthew J Betts, [3]Janet Lei, [4]Guochao Wei, [5]Qiuying Bao, [6]Timo Kehl, [7]Rob B Russell, [8]Robert B. Russell, [9]Martin Löchelt [Full author list] | Retrovirology [curation] | DOI: 10.1186/S12977-016-0291-8
PubMed: 27549192 | | 2016-08-22 |
| An organelle-specific protein landscape identifies novel diseases and molecular mechanisms | [1]Karsten Boldt, [2]Jeroen van Reeuwijk, [3]Qianhao Lu, [4]Konstantinos Koutroumpas, [5]Thanh-Minh T Nguyen, [6]Yves Texier, [7]Sylvia E C van Beersum, [8]Nicola Williams, [9]Jason R Willer, [10]Dorus A Mans, ..., [52]Rachel H Giles, [53]Marius Ueffing, [54]Robert B. Russell, [55]Rob B Russell, [56]Ronald Roepman, ... [Full author list] | Nature Communications [curation] | DOI: 10.1038/NCOMMS11491
PubMed: 27173435 | | 2016-05-13 |
| Genes encoding members of the JAK-STAT pathway or epigenetic regulators are recurrently mutated in T-cell prolymphocytic leukaemia. | [1]Cristina López, [2]Anke K Bergmann, [3]Ulrike Paul, [4]Eva M Murga Penas, [5]Inga Nagel, [6]Matthew J Betts, [7]Patricia Johansson, [8]Matthias Ritgen, [9]Tycho Baumann, [10]Marta Aymerich, [11]Sandrine Jayne, [12]Robert B. Russell, [13]Rob B Russell, [14]Elías Campo, [15]Martin Dyer, [16]Jan Dürig, [17]Reiner Siebert [Full author list] | British Journal of Haematology [curation] | DOI: 10.1111/BJH.13952
PubMed: 26917488 | leukemia [curation] | 2016-02-25 |
| DNA methylome analysis in Burkitt and follicular lymphomas identifies differentially methylated regions linked to somatic mutation and transcriptional control | [1]Helene Kretzmer, [2]Stephan H Bernhart, [3]Wei Wang, [4]Andrea Haake, [5]Marc A Weniger, [6]Anke K Bergmann, [7]Matthew J Betts, [8]Enrique Carrillo-de-Santa-Pau, [9]Gero Doose, [10]Jana Gutwein, ..., [46]Philip Rosenstiel, [47]Maciej Rosolowski, [48]Robert B. Russell, [49]Markus Schilhabel, [50]Matthias Schlesner, ... [Full author list] | Nature Genetics [curation] | DOI: 10.1038/NG.3413
PubMed: 26437030 | Burkitt lymphoma [curation] | 2015-10-05 |
| The PCBP1 gene encoding poly(rC) binding protein I is recurrently mutated in Burkitt lymphoma | [1]Rabea Wagener, [2]Sietse M Aukema, [3]Matthias Schlesner, [4]Andrea Haake, [5]Birgit Burkhardt, [6]Alexander Claviez, [7]Hans Guenter Drexler, [8]Michael Hummel, [9]Markus Kreuz, [10]Markus Loeffler, ..., [15]Marius Rohde, [16]Matthew J Betts, [17]Robert B. Russell, [18]Stephan H Bernhart, [19]Steve Hoffmann, ... [Full author list] | Genes, Chromosomes and Cancer [curation] | DOI: 10.1002/GCC.22268
PubMed: 26173642 | Burkitt lymphoma [curation] | 2015-07-14 |
| Systematic exploration of the ciliary protein landscape by large-scale affinity proteomics | [1]K Boldt, [2]J Van Reeuwijk, [3]Q Lu, [4]K Koutroumpas, [5]N Horn, [6]S Van Beersum, [7]Y Texier, [8]TM Nguyen, [9]JR Willer, [10]N Katsanis, [11]F Képès, [12]Robert B. Russell, [13]Rob B Russell, [14]M Ueffing, [15]R Roepman [Full author list] | Cilia [curation] | DOI: 10.1186/2046-2530-4-S1-P89
| | 2015-07-13 |
| From proteomic data to networks: statistics and methods reveal ciliary protein interaction landscape | [1]Q Lu, [2]K Koutroumpas, [3]K Boldt, [4]J Van Reeuwijk, [5]N Katsanis, [6]F Képès, [7]R Roepman, [8]M Ueffing, [9]Robert B. Russell, [10]Robert B. Russell [Full author list] | Cilia [curation] | DOI: 10.1186/2046-2530-4-S1-P90
| statistics [curation] | 2015-07-13 |
| A systems biology approach towards the prediction of ciliopathy mechanisms | [1]K Koutroumpas, [2]J Van Dam, [3]G Toedt, [4]Q Lu, [5]J Van Reeuwijk, [6]K Boldt, [7]T Gibson, [8]R Roepman, [9]M Ueffing, [10]Rob B Russell, [11]Robert B. Russell, [12]M Huynen, [13]Mohamed Elati, [14]F Képès [Full author list] | Cilia [curation] | DOI: 10.1186/2046-2530-4-S1-P88
| ciliopathy [curation] | 2015-07-13 |
| Data Sources for Signature Discovery in Toxicology | [1]Dragana Mitic Potkrajac, [2]Branka Rakic, [3]Gordana Apic, [4]Robert B. Russell [Full author list] | Methods in pharmacology and toxicology [curation] | DOI: 10.1007/978-1-4939-2778-4_4
| | 2015-01-01 |
| Mechismo: predicting the mechanistic impact of mutations and modifications on molecular interactions | [1]Matthew J Betts, [2]Qianhao Lu, [3]YingYing Jiang, [4]Armin Drusko, [5]Oliver Wichmann, [6]Mathias Utz, [7]Ilse A Valtierra-Gutiérrez, [8]Matthias Schlesner, [9]Natalie Jaeger, [10]David T. W. Jones, [11]Stefan M. Pfister, [12]Peter Lichter, [13]Roland Eils, [14]Reiner Siebert, [15]Peer Bork, [16]G. Apic, [17]Anne-Claude Gavin, [18]Robert B. Russell, [19]Rob B Russell [Full author list] | Nucleic Acids Research [curation] | DOI: 10.1093/NAR/GKU1094
PubMed: 25392414 | molecular interaction [curation] | 2014-11-11 |
| Characterizing protein interactions employing a genome-wide siRNA cellular phenotyping screen | [1]Apichat Suratanee, [2]Martin Schaefer, [3]Matthew J Betts, [4]Zita Soons, [5]Heiko Mannsperger, [6]Nathalie Harder, [7]Marcus Oswald, [8]Markus Gipp, [9]Ellen Ramminger, [10]Guillermo Marcus, [11]Reinhard Männer, [12]Karl Rohr, [13]Erich Wanker, [14]Rob B Russell, [15]Robert B. Russell, [16]Miguel A Andrade-Navarro, [17]Roland Eils, [18]Rainer König [Full author list] | PLOS Computational Biology [curation] | DOI: 10.1371/JOURNAL.PCBI.1003814
PubMed: 25255318 | | 2014-09-25 |
| The mutational pattern of primary lymphoma of the central nervous system determined by whole-exome sequencing. | [1]I Vater, [2]M Montesinos-Rongen, [3]Matthias Schlesner, [4]A Haake, [5]F Purschke, [6]R Sprute, [7]N Mettenmeyer, [8]I Nazzal, [9]I Nagel, [10]J Gutwein, [11]J Richter, [12]Ivo Buchhalter, [13]Rob B Russell, [14]Robert B. Russell, [15]O D Wiestler, [16]Roland Eils, [17]M Deckert, [18]R Siebert [Full author list] | Leukemia [curation] | DOI: 10.1038/LEU.2014.264
PubMed: 25189415 | | 2014-09-05 |
| SMARCA4-mutated atypical teratoid/rhabdoid tumors are associated with inherited germline alterations and poor prognosis | [1]Martin Hasselblatt, ..., [2]Inga Nagel, [3]Florian Oyen, [4]Kerstin Bartelheim, [5]Rob B Russell, [6]Ulrich Schüller, [7]Reimar C Junckerstorff, [8]Marc Rosenblum, [9]Ali Alassiri, [10]Sabrina Rossi, ..., [5-Q37379873]Robert B. Russell, ... [Full author list] | Acta Neuropathologica [curation] | DOI: 10.1007/S00401-014-1323-X
PubMed: 25060813 | | 2014-09-01 |
| Recurrent RHOA mutations in pediatric Burkitt lymphoma treated according to the NHL-BFM protocols | [1]Marius Rohde, [2]Julia Richter, [3]Matthias Schlesner, [4]Matthew J Betts, [5]Alexander Claviez, [6]Bettina R Bonn, [7]Martin Zimmermann, [8]Christine Damm-Welk, [9]Rob B Russell, [10]Robert B. Russell, [11]Arndt Borkhardt, [12]Roland Eils, [13]Jessica I Hoell, [14]Monika Szczepanowski, [15]Ilske Oschlies, [16]Wolfram Klapper, [17]Birgit Burkhardt, [18]Reiner Siebert, [19]German ICGC MMML-Seq-Project, [20]NHL-BFM Study Group [Full author list] | Genes, Chromosomes and Cancer [curation] | DOI: 10.1002/GCC.22202
PubMed: 25044415 | Burkitt lymphoma [curation] | 2014-07-08 |
| An RNAi screen identifies KIF15 as a novel regulator of the endocytic trafficking of integrin | [1]Anastasia Eskova, [2]Bettina Knapp, [3]Dorota Matelska, [4]Susanne Reusing, [5]Antti Arjonen, [6]Tautvydas Lisauskas, [7]Rainer Pepperkok, [8]Robert B. Russell, [9]Roland Eils, [10]Johanna Ivaska, [11]Lars Kaderali, [12]Holger Erfle, [13]Vytaute Starkuviene [Full author list] | Journal of Cell Science [curation] | DOI: 10.1242/JCS.137281
PubMed: 24659801 | | 2014-03-21 |
| Recurrent mutation of JAK3 in T-cell prolymphocytic leukemia. | [1]Anke K Bergmann, [2]Sina Schneppenheim, [3]Marc Seifert, [4]Matthew J Betts, [5]Andrea Haake, [6]Cristina López, [7]Eva Maria Murga Penas, [8]Inga Vater, [9]Sandrine Jayne, [10]Martin Dyer, [11]Martin Schrappe, [12]Ulrich Dührsen, [13]Ole Ammerpohl, [14]Robert B. Russell, [15]Rob B Russell, [16]Ralf Küppers, [17]Jan Dürig, [18]Reiner Siebert [Full author list] | Genes, Chromosomes and Cancer [curation] | DOI: 10.1002/GCC.22141
PubMed: 24446122 | leukemia [curation] | 2014-01-21 |
| A recurrent 11q aberration pattern characterizes a subset of MYC-negative high-grade B-cell lymphomas resembling Burkitt lymphoma | [1]Itziar Salaverria, [2]Idoia Martin-Guerrero, [3]Rabea Wagener, [4]Markus Kreuz, [5]Christian W Kohler, [6]Julia Richter, [7]Barbara Pienkowska-Grela, [8]Patrick Adam, [9]Birgit Burkhardt, [10]Alexander Claviez, ..., [21]Ilske Oschlies, [22]Maciej Rosolowski, [23]Robert B. Russell, [24]Grzegorz Rymkiewicz, [25]Detlev Schindler, ... [Full author list] | Blood [curation] | DOI: 10.1182/BLOOD-2013-06-507996
PubMed: 24398325 | Burkitt lymphoma [curation] | 2014-01-07 |
| Molecular dissection of human Argonaute proteins by DNA shuffling | [1]Nina Schürmann, [2]Leonardo G Trabuco, [3]Christian Bender, [4]Robert B. Russell, [5]Rob B Russell, [6]Dirk Grimm [Full author list] | Nature Structural & Molecular Biology [curation] | DOI: 10.1038/NSMB.2607
PubMed: 23748378 | | 2013-06-09 |
| Recurrent mutation of the ID3 gene in Burkitt lymphoma identified by integrated genome, exome and transcriptome sequencing | [1]Julia Richter, [2]Matthias Schlesner, [3]Steve Hoffmann, [4]Markus Kreuz, [5]Ellen Leich, [6]Birgit Burkhardt, [7]Maciej Rosolowski, [8]Ole Ammerpohl, [9]Rabea Wagener, [10]Stephan H. Bernhart, ..., [13]Maren Paulsen, [14]Simone Lipinski, [15]Robert B. Russell, [16]Sabine Adam-Klages, [17]Gordana Apic, ... [Full author list] | Nature Genetics [curation] | DOI: 10.1038/NG.2469
PubMed: 23143595 | transcriptome [curation]; Burkitt lymphoma [curation] | 2012-11-11 |
| Editorial | [1]Andrei N. Lupas, [2]Robert B. Russell [Full author list] | Journal of Structural Biology [curation] | DOI: 10.1016/J.JSB.2012.05.012
PubMed: 22641090 | | 2012-09-01 |
| Negative protein-protein interaction datasets derived from large-scale two-hybrid experiments | [1]Leonardo G Trabuco, [2]Matthew J Betts, [3]Rob B Russell, [4]Robert B. Russell [Full author list] | Methods [curation] | DOI: 10.1016/J.YMETH.2012.07.028
PubMed: 22884951 | protein-protein interaction [curation] | 2012-08-04 |
| Computational identification of novel amino-acid interactions in HIV Gag via correlated evolution | [1]Olga V Kalinina, [2]Heike Oberwinkler, [3]Bärbel Glass, [4]Hans-Georg Kräusslich, [5]Robert B. Russell, [6]Rob B Russell, [7]John Briggs [Full author list] | PLOS One [curation] | DOI: 10.1371/JOURNAL.PONE.0042468
PubMed: 22879995 | | 2012-08-03 |
| Dissecting the genomic complexity underlying medulloblastoma | [1]David T. W. Jones, [2]Natalie Jäger, [3]Marcel Kool, [4]Thomas Zichner, [5]Barbara Hutter, [6]Marc Sultan, [7]Yoon-Jae Cho, [8]Trevor J Pugh, [9]Volker Hovestadt, [10]Adrian M Stütz, ..., [44]David J. H. Shih, [45]Matthew J Betts, [46]Robert B. Russell, [47]Simona Coco, [48]Gian Paolo Tonini, ... [Full author list] | Nature [curation] | DOI: 10.1038/NATURE11284
PubMed: 22832583 | medulloblastoma [curation] | 2012-08-02 |
| PepSite: prediction of peptide-binding sites from protein surfaces | [1]Leonardo G Trabuco, [2]Stefano Lise, [3]Evangelia Petsalaki, [4]Robert B. Russell [Full author list] | Nucleic Acids Research [curation] | DOI: 10.1093/NAR/GKS398
PubMed: 22600738 | | 2012-05-16 |
| Cross-talk between phosphorylation and lysine acetylation in a genome-reduced bacterium | [1]Vera van Noort, [2]Jan Seebacher, [3]Samuel Bader, [4]Shabaz Mohammed, [5]Ivana Vonkova, [6]Matthew J Betts, [7]Sebastian Kühner, [8]Runjun Kumar, [9]Tobias Maier, [10]Martina O'Flaherty, [11]Vladimir Rybin, [12]Arne Schmeisky, [13]Eva Yus, [14]Jörg Stülke, [15]Luis Serrano, [16]Robert B. Russell, [17]Rob B Russell, [18]Albert J.R. Heck, [19]Peer Bork, [20]Anne-Claude Gavin [Full author list] | Molecular Systems Biology [curation] | DOI: 10.1038/MSB.2012.4
PubMed: 22373819 | phosphorylation [curation] | 2012-02-28 |
| Topic pages: PLoS Computational Biology meets Wikipedia | [1]Shoshana Wodak, [2]Daniel Mietchen, [3]Andrew M Collings, [4]Robert B. Russell, [5]Philip Bourne [Full author list] | PLOS Computational Biology [curation] | DOI: 10.1371/JOURNAL.PCBI.1002446
PubMed: 22479174 | Wikipedia [curation]; English Wikipedia [curation]; computational biology [curation]; PLOS Computational Biology [curation]; health information on Wikipedia [curation] | 2012-01-01 |
| ProtChemSI: a network of protein-chemical structural interactions | [1]Olga V Kalinina, [2]Oliver Wichmann, [3]G. Apic, [4]Robert B. Russell, [5]Rob B Russell [Full author list] | Nucleic Acids Research [curation] | DOI: 10.1093/NAR/GKR1049
PubMed: 22110041 | | 2011-11-21 |
| Combinations of protein-chemical complex structures reveal new targets for established drugs | [1]Olga V Kalinina, [2]Oliver Wichmann, [3]Gordana Apic, [4]Robert B. Russell [Full author list] | PLOS Computational Biology [curation] | DOI: 10.1371/JOURNAL.PCBI.1002043
PubMed: 21573205 | | 2011-05-01 |
| The three-dimensional molecular structure of the desmosomal plaque | [1]Ashraf Al-Amoudi, [2]Daniel Castaño-Diez, [3]Damien Devos, [4]Robert B. Russell, [5]Graham T Johnson, [6]Achilleas S Frangakis [Full author list] | Proceedings of the National Academy of Sciences of the United States of America [curation] | DOI: 10.1073/PNAS.1019469108
PubMed: 21464301 | molecular geometry [curation] | 2011-04-04 |
| Content disputes in Wikipedia reflect geopolitical instability | [1]G. Apic, [2]Matthew J Betts, [3]Robert B. Russell [Full author list] | PLOS One [curation] | DOI: 10.1371/JOURNAL.PONE.0020902
PubMed: 21731630 | Wikipedia [curation] | 2011-01-01 |
| A systematic screen for protein-lipid interactions in Saccharomyces cerevisiae | [1]Oriol Gallego, [2]Matthew J Betts, [3]Jelena Gvozdenovic-Jeremic, [4]Kenji Maeda, [5]Christian Matetzki, [6]Carmen Aguilar-Gurrieri, [7]Pedro Beltran-Alvarez, [8]Stefan Bonn, [9]Carlos Fernández-Tornero, [10]Lars Juhl Jensen, [11]Michael Kuhn, [12]Jamie Trott, [13]Vladimir Rybin, [14]Christoph W Müller, [15]Peer Bork, [16]Marko Kaksonen, [17]Robert B. Russell, [18]Anne-Claude Gavin [Full author list] | Molecular Systems Biology [curation] | DOI: 10.1038/MSB.2010.87
PubMed: 21119626 | applied mathematics [curation]; information system [curation]; Saccharomyces cerevisiae [curation]; Phosphatidylinositol 4,5-bisphosphate-binding protein YIL105C [curation] | 2010-11-01 |
| Domain recombination: a workhorse for evolutionary innovation | [1]G. Apic, [2]Rob B Russell, [3]Robert B. Russell [Full author list] | Science Signaling [curation] | DOI: 10.1126/SCISIGNAL.3139PE30
PubMed: 20841565 | evolutionary novelty [curation] | 2010-09-14 |
| An automated stochastic approach to the identification of the protein specificity determinants and functional subfamilies | [1]Pavel Mazin, [2]Mikhail Gelfand, [3]Andrey A Mironov, [4]Aleksandra B Rakhmaninova, [5]Anatoly R Rubinov, [6]Rob B Russell, [7]Robert B. Russell, [8]Olga V Kalinina [Full author list] | Algorithms for Molecular Biology [curation] | DOI: 10.1186/1748-7188-5-29
PubMed: 20633297 | automation [curation] | 2010-07-15 |
| WD40 proteins propel cellular networks | [1]Christian U Stirnimann, [2]Evangelia Petsalaki, [3]Robert B. Russell, [4]Rob B Russell, [5]Christoph W Müller [Full author list] | Trends in Biochemical Sciences [curation] | DOI: 10.1016/J.TIBS.2010.04.003
PubMed: 20451393 | | 2010-05-05 |
| Modular architecture of nucleotide-binding pockets. | [1]Pier Federico Gherardini, [2]Gabriele Ausiello, [3]Robert B. Russell, [4]Manuela Helmer-Citterich [Full author list] | Nucleic Acids Research [curation] | DOI: 10.1093/NAR/GKQ090
PubMed: 20185567 | binding pocket [curation] | 2010-02-25 |
| Proteome organization in a genome-reduced bacterium | [1]Sebastian Kühner, ..., [2]Vera van Noort, ..., [3]Matthew J. Betts, [4]Alejandra Leo-Macias, [5]Claire Batisse, [6]Michaela Rode, [7]Takuji Yamada, [8]Tobias Maier, [9]Samuel Bader, [10]Pedro Beltran-Alvarez, ..., [22]Bettina Böttcher, [23]Achilleas S. Frangakis, [24]Robert B. Russell, [25]Luis Serrano, [26]Peer Bork, ... [Full author list] | Science [curation] | DOI: 10.1126/SCIENCE.1176343
PubMed: 19965468 | | 2009-11-27 |
| Impact of genome reduction on bacterial metabolism and its regulation | [1]Eva Yus, [2]Tobias Maier, [3]Konstantinos Michalodimitrakis, [4]Vera van Noort, [5]Takuji Yamada, [6]Wei-Hua Chen, [7]Judith A H Wodke, [8]Marc Güell, [9]Sira Martínez, [10]Ronan Bourgeois, ..., [16]Richard Herrmann, [17]Ricardo Gutiérrez Gallego, [18]Robert B. Russell, [19]Rob B Russell, [20]Anne-Claude Gavin, ... [Full author list] | Science [curation] | DOI: 10.1126/SCIENCE.1177263
PubMed: 19965476 | | 2009-11-01 |
| A more structured metabolome. | [1]Matthew J Betts, [2]Robert B. Russell [Full author list] | Nature Structural & Molecular Biology [curation] | DOI: 10.1038/NSMB1109-1125
PubMed: 19888310 | | 2009-11-01 |
| Hb M Dothan [beta 25/26 (B7/B8)/(GGT/GAG-->GAG//Gly/Glu-->Glu]; a new mechanism of unstable methemoglobin variant and molecular characteristics | [1]F Kutlar, [2]L M Hilliard, [3]L Zhuang, [4]N Patel, [5]B Eroglu, [6]S E Meiler, [7]H Carmichael, [8]Robert B. Russell, [9]Rob B Russell, [10]A Kutlar [Full author list] | Blood Cells, Molecules and Diseases [curation] | DOI: 10.1016/J.BCMD.2009.08.006
PubMed: 19758826 | | 2009-09-15 |
| Combining specificity determining and conserved residues improves functional site prediction | [1]Olga V Kalinina, [2]Mikhail Gelfand, [2-Q4135107]Mikhail Gelfand, [3]Robert B. Russell, [4]Rob B Russell [Full author list] | BMC Bioinformatics [curation] | DOI: 10.1186/1471-2105-10-174
PubMed: 19508719 | | 2009-06-09 |
| Accurate prediction of peptide binding sites on protein surfaces | [1]Evangelia Petsalaki, [2]Alexander Stark, [3]Eduardo García-Urdiales, [4]Rob B Russell, [5]Robert B. Russell [Full author list] | PLOS Computational Biology [curation] | DOI: 10.1371/JOURNAL.PCBI.1000335
PubMed: 19325869 | | 2009-03-27 |
| Targeting and tinkering with interaction networks | [1]Rob B Russell, [2]Robert B. Russell, [3]Patrick Aloy [Full author list] | Nature Chemical Biology [curation] | DOI: 10.1038/NCHEMBIO.119
PubMed: 18936751 | | 2008-11-01 |
| Interactions between the Fyn SH3-domain and adaptor protein Cbp/PAG derived ligands, effects on kinase activity and affinity | [1]Silje A Solheim, [2]Evangelia Petsalaki, [3]Anne J Stokka, [4]Robert B. Russell, [5]Rob B Russell, [6]Kjetil Taskén, [7]Torunn Berge [Full author list] | FEBS Journal [curation] | DOI: 10.1111/J.1742-4658.2008.06626.X
PubMed: 18721137 | SH3 domain [curation] | 2008-08-21 |
| Peptide-mediated interactions in biological systems: new discoveries and applications | [1]Evangelia Petsalaki, [2]Robert B. Russell, [3]Rob B Russell [Full author list] | Current Opinion in Biotechnology [curation] | DOI: 10.1016/J.COPBIO.2008.06.004
PubMed: 18602004 | | 2008-07-12 |
| Unraveling Mechanisms of Toxicity with the Power of Pathways: ToxWiz Tool as an Illustrative Example | [1]Mark P. Kühnel, [2]Bojana Cosovic, [3]Goran Medic, [4]Robert B. Russell, [5]Gordana Apic [Full author list] | | DOI: 10.1002/9780470399279.CH9
| machine learning [curation]; health informatics [curation] | 2008-04-21 |
| Targeting and tinkering with interaction networks. | [1]Patrick Aloy, [2]Robert B. Russell [Full author list] | FEBS Letters [curation] | DOI: 10.1016/J.FEBSLET.2008.02.069
PubMed: 18328822 | | 2008-03-06 |
| Subunit architecture of intact protein complexes from mass spectrometry and homology modeling | [1]Thomas Taverner, [2]Helena Hernández, [3]Michal Sharon, [4]Brandon T. Ruotolo, [5]Dijana Matak-Vinković, [6]Damien Devos, [7]Robert B. Russell, [8]Rob B Russell, [9]Carol V. Robinson [Full author list] | Accounts of Chemical Research [curation] | DOI: 10.1021/AR700218Q
PubMed: 18314965 | mass spectrometry [curation] | 2008-03-04 |
| A careful disorderliness in the proteome: sites for interaction and targets for future therapies | [1]Rob B Russell, [2]Robert B. Russell, [3]Toby J. Gibson [Full author list] | FEBS Letters [curation] | DOI: 10.1016/J.FEBSLET.2008.02.027
PubMed: 18284921 | | 2008-02-20 |
| SuperTarget and Matador: resources for exploring drug-target relationships | [1]Stefan Günther, [2]Michael Kuhn, [3]Mathias Dunkel, [4]Monica Campillos, [5]Christian Senger, [6]Evangelia Petsalaki, [7]Jessica Ahmed, [8]Eduardo Garcia Urdiales, [9]Andreas Gewiess, [10]Lars Juhl Jensen, [11]Reinhard Schneider, [12]Roman Skoblo, [13]Robert B. Russell, [14]Philip Bourne, [15]Peer Bork, [16]Robert Preissner [Full author list] | Nucleic Acids Research [curation] | DOI: 10.1093/NAR/GKM862
PubMed: 17942422 | | 2008-01-01 |
| Classification of protein folds | [1]Rob B Russell, [2]Robert B. Russell [Full author list] | Molecular Biotechnology [curation] | DOI: 10.1007/S12033-007-0032-2
PubMed: 17873410 | protein folding [curation] | 2007-07-01 |
| A more complete, complexed and structured interactome | [1]Damien Devos, [2]Robert B. Russell, [3]Rob B Russell [Full author list] | Current Opinion in Structural Biology [curation] | DOI: 10.1016/J.SBI.2007.05.011
PubMed: 17574831 | | 2007-06-15 |
| Systematic Discovery of In Vivo Phosphorylation Networks | [1]Rune Linding, [2]Lars Juhl Jensen, [3]Gerard J. Ostheimer, [4]Marcel A T M van Vugt, [5]Claus Jørgensen, [6]Ioana M. Miron, [7]Francesca Diella, [8]Karen Colwill, [9]Lorne Taylor, [10]Kelly Elder, ..., [16]Leona D. Samson, [17]James R. Woodgett, [18]Robert B. Russell, [19]Peer Bork, [20]Michael B. Yaffe, ... [Full author list] | Cell [curation] | DOI: 10.1016/J.CELL.2007.05.052
PubMed: 17570479 | phosphorylation [curation] | 2007-06-01 |
| The hard cell: from proteomics to a whole cell model | [1]Matthew J Betts, [2]Robert B. Russell [Full author list] | FEBS Letters [curation] | DOI: 10.1016/J.FEBSLET.2007.05.062
PubMed: 17555749 | | 2007-05-30 |
| Differential localization of coatomer complex isoforms within the Golgi apparatus | [1]Jörg Moelleken, [2]Jörg Malsam, [3]Matthew J Betts, [4]Ali Movafeghi, [5]Ingeborg Reckmann, [6]Ingrid Meissner, [7]Andrea Hellwig, [8]Robert B. Russell, [9]Rob B Russell, [10]Thomas Söllner, [11]Britta Brügger, [12]Felix T Wieland [Full author list] | Proceedings of the National Academy of Sciences of the United States of America [curation] | DOI: 10.1073/PNAS.0611360104
PubMed: 17360540 | Golgi apparatus [curation] | 2007-03-07 |
| A shortcut to peptides to modulate platelets | [1]G. Apic, [2]Rob B Russell, [3]Robert B. Russell [Full author list] | Nature Chemical Biology [curation] | DOI: 10.1038/NCHEMBIO0207-83
PubMed: 17235341 | | 2007-02-01 |
| Proline-rich regions in transcriptional complexes: heading in many directions | [1]Victor Neduva, [2]Robert B. Russell, [3]Rob B Russell [Full author list] | Science's STKE : signal transduction knowledge environment [curation] | DOI: 10.1126/STKE.3692007PE1
PubMed: 17228057 | | 2007-01-16 |
| Peptides mediating interaction networks: new leads at last | [1]Victor Neduva, [2]Robert B. Russell [Full author list] | Current Opinion in Biotechnology [curation] | DOI: 10.1016/J.COPBIO.2006.08.002
PubMed: 16962311 | | 2006-09-07 |
| DILIMOT: discovery of linear motifs in proteins | [1]Victor Neduva, [2]Rob B Russell, [3]Robert B. Russell [Full author list] | Nucleic Acids Research [curation] | DOI: 10.1093/NAR/GKL159
PubMed: 16845024 | | 2006-07-01 |
| Proteome survey reveals modularity of the yeast cell machinery | [1]Anne-Claude Gavin, [2]Patrick Aloy, [3]Paola Grandi, [4]Roland Krause, [5]Markus Boesche, [6]Martina Marzioch, [7]Christina Rau, [8]Lars Juhl Jensen, [9]Sonja Bastuck, [10]Birgit Dümpelfeld, ..., [29]Bernhard Kuster, [30]Peer Bork, [31]Robert B. Russell, [32]Giulio Superti-Furga [Full author list] | Nature [curation] | DOI: 10.1038/NATURE04532
PubMed: 16429126 | yeast [curation]; proteome [curation] | 2006-03-30 |
| Structural systems biology: modelling protein interactions | [1]Patrick Aloy, [2]Robert B. Russell, [3]Rob B Russell [Full author list] | Nature Reviews Molecular Cell Biology [curation] | DOI: 10.1038/NRM1859
PubMed: 16496021 | | 2006-03-01 |
| Harry Potter and the structural biologist's (Key)stone | [1]Damien Devos, [2]Olga V Kalinina, [3]Robert B. Russell, [4]Rob B Russell [Full author list] | Genome Biology [curation] | DOI: 10.1186/GB-2006-7-12-333
PubMed: 17201936 | Harry Potter [curation] | 2006-01-01 |
| Animal MicroRNAs confer robustness to gene expression and have a significant impact on 3'UTR evolution | [1]Alexander Stark, [2]Julius Brennecke, [3]Natascha Bushati, [4]Robert B. Russell, [5]Rob B Russell, [6]Stephen M Cohen [Full author list] | Cell [curation] | DOI: 10.1016/J.CELL.2005.11.023
PubMed: 16337999 | microRNA [curation] | 2005-12-01 |
| Systematic discovery of new recognition peptides mediating protein interaction networks | [1]Victor Neduva, [2]Rune Linding, [3]Isabelle Su-Angrand, [4]Alexander Stark, [5]Federico De Masi, [6]Toby J. Gibson, [7]Joe Lewis, [8]Luis Serrano, [9]Robert B. Russell, [10]Rob B Russell [Full author list] | PLOS Biology [curation] | DOI: 10.1371/JOURNAL.PBIO.0030405
PubMed: 16279839 | | 2005-11-15 |
| Structural similarity to bridge sequence space: finding new families on the bridges | [1]Parantu K Shah, [2]Patrick Aloy, [3]Peer Bork, [4]Robert B. Russell [Full author list] | Protein Science [curation] | DOI: 10.1110/PS.041187405
PubMed: 15840833 | | 2005-05-01 |
| Linear motifs: evolutionary interaction switches | [1]Victor Neduva, [2]Rob B Russell, [3]Robert B. Russell [Full author list] | FEBS Letters [curation] | DOI: 10.1016/J.FEBSLET.2005.04.005
PubMed: 15943979 | | 2005-04-18 |
| Principles of microRNA-target recognition | [1]Julius Brennecke, [2]Alexander Stark, [3]Robert B. Russell, [4]Rob B Russell, [5]Stephen M Cohen [Full author list] | PLOS Biology [curation] | DOI: 10.1371/JOURNAL.PBIO.0030085
PubMed: 15723116 | microRNA [curation] | 2005-03-01 |
| Structure-based systems biology: a zoom lens for the cell | [1]Patrick Aloy, [2]Rob B Russell, [3]Robert B. Russell [Full author list] | FEBS Letters [curation] | DOI: 10.1016/J.FEBSLET.2005.02.014
PubMed: 15763563 | | 2005-03-01 |
| Illuminating drug discovery with biological pathways | [1]Gordana Apic, [2]Tijana Ignjatovic, [3]Scott Boyer, [4]Robert B. Russell [Full author list] | FEBS Letters [curation] | DOI: 10.1016/J.FEBSLET.2005.02.023
PubMed: 15763566 | drug discovery [curation] | 2005-03-01 |
| Systems Biology: Understanding the Biological Mosaic | [1]Robert B. Russell, [2]Giulio Superti-Furga [Full author list] | FEBS Letters [curation] | DOI: 10.1016/J.FEBSLET.2005.02.029
| | 2005-02-24 |
| Protein complexes: structure prediction challenges for the 21st century | [1]Patrick Aloy, [2]Matthieu Pichaud, [3]Robert B. Russell [Full author list] | Current Opinion in Structural Biology [curation] | DOI: 10.1016/J.SBI.2005.01.012
PubMed: 15718128 | protein structure prediction [curation] | 2005-02-01 |
| 3did: interacting protein domains of known three-dimensional structure | [1]Amelie Stein, [2]Robert B. Russell, [3]Rob B Russell, [4]Patrick Aloy [Full author list] | Nucleic Acids Research [curation] | DOI: 10.1093/NAR/GKI037
PubMed: 15608228 | protein structure [curation] | 2005-01-01 |
| Ten thousand interactions for the molecular biologist | [1]Patrick Aloy, [2]Rob B Russell, [3]Robert B. Russell [Full author list] | Nature Biotechnology [curation] | DOI: 10.1038/NBT1018
PubMed: 15470473 | | 2004-10-01 |
| Finding functional sites in structural genomics proteins | [1]Alexander Stark, [2]Alexander Shkumatov, [3]Rob B Russell, [4]Robert B. Russell [Full author list] | Structure [curation] | DOI: 10.1016/J.STR.2004.05.012
PubMed: 15296734 | genomics [curation] | 2004-08-01 |
| Geminate structures of African cassava mosaic virus | [1]Bettina Böttcher, [2]Sigrid Unseld, [3]Hugo Ceulemans, [4]Robert B. Russell, [5]Rob B Russell, [6]Holger Jeske [Full author list] | Journal of Virology [curation] | DOI: 10.1128/JVI.78.13.6758-6765.2004
PubMed: 15194750 | African cassava mosaic virus [curation] | 2004-07-01 |
| A structural perspective on protein-protein interactions. | [1]Robert B. Russell, [2]Frank Alber, [3]Patrick Aloy, [4]Fred P Davis, [5]Dmitry Korkin, [6]Matthieu Pichaud, [7]Maya Topf, [8]Andrej Šali [Full author list] | Current Opinion in Structural Biology [curation] | DOI: 10.1016/J.SBI.2004.04.006
PubMed: 15193311 | protein-protein interaction [curation] | 2004-06-01 |
| Systematic searches for molecular synapomorphies in model metazoan genomes give some support for Ecdysozoa after accounting for the idiosyncrasies of Caenorhabditis elegans | [1]Richard R Copley, [2]Patrick Aloy, [3]Robert B. Russell, [4]Maximilian J Telford [Full author list] | Evolution & Development [curation] | DOI: 10.1111/J.1525-142X.2004.04021.X
PubMed: 15099303 | Ecdysozoa [curation]; Caenorhabditis elegans [curation] | 2004-05-01 |
| Fast fitting of atomic structures to low-resolution electron density maps by surface overlap maximization | [1]Hugo Ceulemans, [2]Robert B Russell, [2-Q55718197]Rob B Russell, [3]Robert B Russell, [3-Q37379873]Robert B. Russell [Full author list] | Journal of Molecular Biology [curation] | DOI: 10.1016/J.JMB.2004.02.066
PubMed: 15099745 | | 2004-05-01 |
| Taking the mystery out of biological networks | [1]Patrick Aloy, [2]Rob B Russell, [3]Robert B. Russell [Full author list] | EMBO Reports [curation] | DOI: 10.1038/SJ.EMBOR.7400129
PubMed: 15060570 | | 2004-04-01 |
| Crystal structure of an archaeal class I aldolase and the evolution of (betaalpha)8 barrel proteins | [1]Esben Lorentzen, [2]Ehmke Pohl, [3]Peter Zwart, [4]Alexander Stark, [5]Robert B. Russell, [6]Thomas Knura, [7]Reinhard Hensel, [8]Bettina Siebers [Full author list] | Journal of Biological Chemistry [curation] | DOI: 10.1074/JBC.M305922200
PubMed: 12941964 | beta barrel [curation]; crystal structure [curation]; protein evolution [curation] | 2003-11-21 |
| Protein disorder prediction: implications for structural proteomics | [1]Linding R, [1-Q87170274]Rune Linding, [2]Lars Juhl Jensen, [2-Q26837548]Lars Juhl Jensen, [3]Diella F, [3-Q29048232]Francesca Diella, [4]Bork P, [4-Q7160367]Peer Bork, [5]Gibson TJ, [5-Q37391213]Toby J. Gibson, [6]Russell RB, [6-Q37379873]Robert B. Russell [Full author list] | Structure [curation] | DOI: 10.1016/J.STR.2003.10.002
PubMed: 14604535 | structural biology [curation] | 2003-11-01 |
| Identification of Drosophila MicroRNA targets | [1]Alexander Stark, [2]Julius Brennecke, [3]Robert B. Russell, [4]Rob B Russell, [5]Stephen M Cohen [Full author list] | PLOS Biology [curation] | DOI: 10.1371/JOURNAL.PBIO.0000060
PubMed: 14691535 | microRNA [curation]; Drosophila [curation] | 2003-10-13 |
| The Relationship Between Sequence and Interaction Divergence in Proteins | [1]Patrick Aloy, [2]Hugo Ceulemans, [3]Alexander Stark, [4]Rob B Russell, [5]Robert B. Russell [Full author list] | Journal of Molecular Biology [curation] | DOI: 10.1016/J.JMB.2003.07.006
PubMed: 14499603 | protein folding [curation]; structural biology [curation] | 2003-10-03 |
| Annotation in three dimensions. PINTS: Patterns in Non-homologous Tertiary Structures | [1]Alexander Stark, [2]Robert B. Russell [Full author list] | Nucleic Acids Research [curation] | DOI: 10.1093/NAR/GKG506
PubMed: 12824322 | | 2003-07-01 |
| bantam encodes a developmentally regulated microRNA that controls cell proliferation and regulates the proapoptotic gene hid in Drosophila | [1]Julius Brennecke, [2]David R Hipfner, [3]Alexander Stark, [4]Robert B. Russell, [5]Stephen M Cohen [Full author list] | Cell [curation] | DOI: 10.1016/S0092-8674(03)00231-9
PubMed: 12679032 | microRNA [curation]; Drosophila [curation]; apoptotic process [curation] | 2003-04-04 |
| A model for statistical significance of local similarities in structure | [1]Alexander Stark, [2]Shamil Sunyaev, [3]Rob B Russell, [4]Robert B. Russell [Full author list] | Journal of Molecular Biology [curation] | DOI: 10.1016/S0022-2836(03)00045-7
PubMed: 12595245 | statistics [curation] | 2003-03-01 |
| Getting the most from your protein sequence | [1]Richard R Copley, [2]Rob B Russell, [3]Robert B. Russell [Full author list] | Methods in Molecular Biology [curation] | DOI: 10.1385/1-59259-342-9:411
PubMed: 12489448 | | 2003-01-01 |
| Predictions without templates: New folds, secondary structure, and contacts in CASP5 | [1]Patrick Aloy, [2]Alexander Stark, [3]Caroline Hadley, [4]Rob B Russell, [5]Robert B. Russell [Full author list] | Proteins [curation] | DOI: 10.1002/PROT.10546
PubMed: 14579333 | biochemistry [curation]; protein folding [curation]; protein secondary structure [curation]; structural biology [curation] | 2003-01-01 |
| Understanding and predicting protein assemblies with 3D structures | [1]Patrick Aloy, [2]Robert B. Russell [Full author list] | Comparative and Functional Genomics [curation] | DOI: 10.1002/CFG.310
PubMed: 18629088 | protein structure [curation] | 2003-01-01 |
| InterPreTS: protein interaction prediction through tertiary structure | [1]Patrick Aloy, [2]Robert B. Russell, [3]Rob B Russell [Full author list] | Bioinformatics [curation] | DOI: 10.1093/BIOINFORMATICS/19.1.161
PubMed: 12499311 | protein structure [curation]; protein structure prediction [curation] | 2003-01-01 |
| The third dimension for protein interactions and complexes | [1]Patrick Aloy, [2]Robert B. Russell, [3]Rob B Russell [Full author list] | Trends in Biochemical Sciences [curation] | DOI: 10.1016/S0968-0004(02)02204-1
PubMed: 12468233 | | 2002-12-01 |
| A dynamic structural model for estrogen receptor-alpha activation by ligands, emphasizing the role of interactions between distant A and E domains | [1]Raphaël Métivier, [2]Alexander Stark, [3]Gilles Flouriot, [4]Michael R Hübner, [5]Heike Brand, [6]Graziella Penot, [7]Dominique Manu, [8]Stefanie Denger, [9]George Reid, [10]Martin Kos, [11]Robert B. Russell, [12]Olivier Kah, [13]Farzad Pakdel, [14]Frank Gannon [Full author list] | Molecular Cell [curation] | DOI: 10.1016/S1097-2765(02)00746-3
PubMed: 12453411 | estrogen [curation] | 2002-11-01 |
| Potential artefacts in protein-interaction networks | [1]Patrick Aloy, [2]Rob B Russell, [3]Robert B. Russell [Full author list] | FEBS Letters [curation] | DOI: 10.1016/S0014-5793(02)03427-0
PubMed: 12387902 | biophysics [curation]; cell biology [curation]; molecular biology [curation]; structural biology [curation] | 2002-10-01 |
| Genomics, proteomics and bioinformatics: all in the same boat | [1]Robert B. Russell [Full author list] | Genome Biology [curation] | DOI: 10.1186/GB-2002-3-10-REPORTS4034
PubMed: 12374575 | bioinformatics [curation]; genomics [curation] | 2002-09-24 |
| A complex prediction: three-dimensional model of the yeast exosome | [1]Patrick Aloy, [2]Francesca D Ciccarelli, [3]Christina Leutwein, [4]Anne-Claude Gavin, [5]Giulio Superti-Furga, [6]Peer Bork, [7]Bettina Böttcher, [8]Rob B Russell, [9]Robert B. Russell [Full author list] | EMBO Reports [curation] | DOI: 10.1093/EMBO-REPORTS/KVF135
PubMed: 12101094 | | 2002-07-01 |
| Fold recognition without folds | [1]Kristin K Koretke, [2]Robert B. Russell, [3]Andrei N. Lupas [Full author list] | Protein Science [curation] | DOI: 10.1110/PS.3590102
PubMed: 12021456 | | 2002-06-01 |
| Structural similarity to link sequence space: new potential superfamilies and implications for structural genomics | [1]Patrick Aloy, [2]Baldomero Oliva, [3]Enrique Querol, [4]Francesc Xavier Avilés Puigvert, [5]Robert B. Russell, [6]Rob B Russell [Full author list] | Protein Science [curation] | DOI: 10.1110/PS.3950102
PubMed: 11967367 | genomics [curation] | 2002-05-01 |
| Interrogating protein interaction networks through structural biology | [1]Patrick Aloy, [2]Rob B Russell, [3]Robert B. Russell [Full author list] | Proceedings of the National Academy of Sciences of the United States of America [curation] | DOI: 10.1073/PNAS.092147999
PubMed: 11972061 | structural biology [curation] | 2002-04-23 |
| Evolutionary relationship between the bacterial HPr kinase and the ubiquitous PEP-carboxykinase: expanding the P-loop nucleotidyl transferase superfamily | [1]Rob B Russell, [2]Robert B. Russell, [3]José Antonio Márquez, [4]Wolfgang Hengstenberg, [5]Klaus Scheffzek [Full author list] | FEBS Letters [curation] | DOI: 10.1016/S0014-5793(02)02518-8
PubMed: 12062398 | biophysics [curation]; cell biology [curation]; molecular biology [curation]; structural biology [curation] | 2002-04-01 |
| Structure of the full-length HPr kinase/phosphatase from Staphylococcus xylosus at 1.95 A resolution: Mimicking the product/substrate of the phospho transfer reactions | [1]Jose Antonio Márquez, [2]Sonja Hasenbein, [3]Brigitte Koch, [4]Sonia Fieulaine, [5]Sylvie Nessler, [6]Robert B. Russell, [7]Wolfgang Hengstenberg, [8]Klaus Scheffzek, [8-Q30169968]Klaus Scheffzek [Full author list] | Proceedings of the National Academy of Sciences of the United States of America [curation] | DOI: 10.1073/PNAS.052461499
PubMed: 11904409 | Staphylococcus xylosus [curation] | 2002-03-01 |
| CASH--a beta-helix domain widespread among carbohydrate-binding proteins | [1]Francesca D Ciccarelli, [2]Richard R Copley, [3]Tobias Doerks, [4]Robert B. Russell, [5]Peer Bork [Full author list] | Trends in Biochemical Sciences [curation] | DOI: 10.1016/S0968-0004(01)02046-1
PubMed: 11852237 | | 2002-02-01 |
| Classification of protein folds | [1]Robert B. Russell, [2]Rob B Russell [Full author list] | Molecular Biotechnology [curation] | DOI: 10.1385/MB:20:1:017
PubMed: 11876296 | protein folding [curation] | 2002-01-01 |
| Predicting function from structure: examples of the serine protease inhibitor canonical loop conformation found in extracellular proteins | [1]R M Jackson, [2]Rob B Russell, [3]Robert B. Russell [Full author list] | Computers & Chemistry [curation] | DOI: 10.1016/S0097-8485(01)00097-3
PubMed: 11765849 | protein function prediction [curation] | 2001-12-01 |
| On the evolution of protein folds: are similar motifs in different protein folds the result of convergence, insertion, or relics of an ancient peptide world? | [1]Lupas AN, [2]Chris Ponting, [3]Robert B. Russell, [4]Rob B Russell [Full author list] | Journal of Structural Biology [curation] | DOI: 10.1006/JSBI.2001.4393
PubMed: 11551179 | protein folding [curation]; protein evolution [curation] | 2001-05-01 |
| Fold recognition from sequence comparisons | [1]K K Koretke, [2]Rob B Russell, [3]Robert B. Russell, [4]A N Lupas [Full author list] | Proteins [curation] | DOI: 10.1002/PROT.10000
PubMed: 11835483 | | 2001-01-01 |
| New roles for structure in biology and drug discovery | [1]Robert B. Russell, [2]Rob B Russell, [3]Eggleston DS [Full author list] | Nature structural biology [curation] | DOI: 10.1038/80691
PubMed: 11103989 | drug discovery [curation] | 2000-11-01 |
| Identification of distant homologues of fibroblast growth factors suggests a common ancestor for all beta-trefoil proteins | [1]Chris Ponting, [2]Rob B Russell, [3]Robert B. Russell [Full author list] | Journal of Molecular Biology [curation] | DOI: 10.1006/JMBI.2000.4087
PubMed: 11183773 | | 2000-10-01 |
| Analysis and prediction of functional sub-types from protein sequence alignments | [1]Hannenhalli SS, [2]Rob B Russell, [3]Robert B. Russell [Full author list] | Journal of Molecular Biology [curation] | DOI: 10.1006/JMBI.2000.4036
PubMed: 11021970 | sequence alignment [curation] | 2000-10-01 |
| A lipid-binding domain in Wnt: a case of mistaken identity? | [1]M R Barnes, [2]Robert B. Russell, [3]Rob B Russell, [4]R R Copley, [5]Chris Ponting, [6]Peer Bork, [7]S Cumberledge, [8]F Reichsman, [9]H M Moore [Full author list] | Current Biology [curation] | DOI: 10.1016/S0960-9822(99)80465-5
PubMed: 10531014 | | 1999-10-01 |
| Supersites within superfolds. Binding site similarity in the absence of homology | [1]Robert B. Russell, [2]Robert B. Russell, [3]Sasieni PD, [4]Sternberg MJ [Full author list] | Journal of Molecular Biology [curation] | DOI: 10.1006/JMBI.1998.2043
PubMed: 9743635 | | 1998-10-01 |
| Detection of protein three-dimensional side-chain patterns: new examples of convergent evolution | [1]R B Russell, [1-Q37379873]Robert B. Russell, [2]Rob B Russell [Full author list] | Journal of Molecular Biology [curation] | DOI: 10.1006/JMBI.1998.1844
PubMed: 9642096 | convergent evolution [curation]; protein evolution [curation] | 1998-06-01 |
| Protein fold irregularities that hinder sequence analysis | [1]Russell RB, [1-Q37379873]Robert B. Russell, [2]Russell RB, [2-Q55718197]Rob B Russell, [3]Chris Ponting [Full author list] | Current Opinion in Structural Biology [curation] | DOI: 10.1016/S0959-440X(98)80071-7
PubMed: 9666333 | protein folding [curation] | 1998-06-01 |
| Recognition of analogous and homologous protein folds: analysis of sequence and structure conservation | [1]Rob B Russell, [2]Robert B. Russell, [3]Saqi MA, [4]Roger Sayle, [5]Paul A. Bates, [6]Michael Sternberg [Full author list] | Journal of Molecular Biology [curation] | DOI: 10.1006/JMBI.1997.1019
PubMed: 9199410 | protein structure [curation]; protein folding [curation] | 1997-06-01 |
| Protein fold recognition by mapping predicted secondary structures | [1]Robert B. Russell, [2]Rob B Russell, [3]Copley RR, [4]Geoffrey J. Barton [Full author list] | Journal of Molecular Biology [curation] | DOI: 10.1006/JMBI.1996.0325
PubMed: 8676374 | protein folding [curation] | 1996-06-01 |
| A novel binding site in catalase is suggested by structural similarity to the calycin superfamily | [1]Rob B Russell, [1-Q37379873]Robert B. Russell, [2]Sternberg MJ, [2-Q15994768]Michael Sternberg [Full author list] | Protein Engineering Design and Selection [curation] | DOI: 10.1093/PROTEIN/9.2.107
PubMed: 9005431 | | 1996-02-01 |
| Swaposins: circular permutations within genes encoding saposin homologues | [1]Chris Ponting, [2]R B Russell, [2-Q55718197]Rob B Russell, [3]Robert B. Russell [Full author list] | Trends in Biochemical Sciences [curation] | DOI: 10.1016/S0968-0004(00)89003-9
PubMed: 7610480 | cyclic permutation [curation] | 1995-05-01 |
| Structure prediction. How good are we? | [1]Rob B Russell, [2]Sternberg MJ, [2-Q37379873]Robert B. Russell, [3]Michael Sternberg [Full author list] | Current Biology [curation] | DOI: 10.1016/S0960-9822(95)00099-6
PubMed: 7583096 | | 1995-05-01 |
| Structural features can be unconserved in proteins with similar folds. An analysis of side-chain to side-chain contacts secondary structure and accessibility | [1]Russell RB, [1-Q55718197]Rob B Russell, [2]Barton GJ, [2-Q37379873]Robert B. Russell, [3]Geoffrey J. Barton [Full author list] | Journal of Molecular Biology [curation] | DOI: 10.1006/JMBI.1994.1733
PubMed: 7966343 | protein folding [curation] | 1994-12-01 |
| The limits of protein secondary structure prediction accuracy from multiple sequence alignment | [1]Russell RB, [1-Q37379873]Robert B. Russell, [2]Barton GJ, [2-Q55718197]Rob B Russell, [3]Geoffrey J. Barton [Full author list] | Journal of Molecular Biology [curation] | DOI: 10.1006/JMBI.1993.1649
PubMed: 8263941 | sequence alignment [curation]; protein structure prediction [curation] | 1993-12-01 |
| Multiple protein sequence alignment from tertiary structure comparison: assignment of global and residue confidence levels | [1]Russell RB, [1-Q55718197]Rob B Russell, [2]Barton GJ, [2-Q37379873]Robert B. Russell, [3]Geoffrey J. Barton [Full author list] | Proteins [curation] | DOI: 10.1002/PROT.340140216
PubMed: 1409577 | sequence alignment [curation] | 1992-10-01 |
| Generation and interpretation of protein sequence and structural multiple alignments | [1]Geoffrey J. Barton, [2]Robert B. Russell, [3]Craig D. Livingstone [Full author list] | The Protein Journal [curation] | DOI: 10.1007/BF01673746
| sequence alignment [curation] | 1992-08-01 |
| Conservation analysis and structure prediction of the SH2 family of phosphotyrosine binding domains | [1]Robert B. Russell, [2]J Breed, [2-Q55718197]Rob B Russell, [3]J. Breed, [4]Geoffrey J. Barton [Full author list] | FEBS Letters [curation] | DOI: 10.1016/0014-5793(92)80579-6
PubMed: 1377638 | | 1992-06-08 |
| Synthesis of a new family of water-soluble tertiary phosphine ligands and of their rhodium(I) complexes; olefin hydrogenation in aqueous and biphasic media | [1]Eric Ranaud, [2]Robert B. Russell, [3]Suzanne Fortier, [4]Stephen J. Brown, [5]Michael C. Baird [Full author list] | Journal of Organometallic Chemistry [curation] | DOI: 10.1016/0022-328X(91)80253-G
| rhodium [curation] | 1991-01-01 |
| Amino-Acid Properties and Consequences of Substitutions | [1]Matthew J. Betts, [2]Robert B. Russell [Full author list] | | DOI: 10.1002/9780470059180.CH13
| | |