| Title | Authors (identified) | Published In | Identifier(s) | Topic | Published Date |
|---|
| Discovery of SARS-CoV-2 antiviral drugs through large-scale compound repurposing | [1]Laura Riva, [2]Shuofeng Yuan, [3]Xin Yin, [4]Laura Martin-Sancho, [5]Naoko Matsunaga, [6]Lars Pache, [7]Sebastian Burgstaller-Muehlbacher, [8]Paul Jesús Tejada Llacsa, [9]Peter Teriete, [10]Mitchell V Hull, ... [Full author list] | Nature [curation] | DOI: 10.1038/S41586-020-2577-1
PubMed: 32707573 | SARS-CoV-2 [curation] | 2020-07-24 |
| Distinguishing Felsenstein zone from Farris zone using neural networks | [1]Alina F Leuchtenberger, [2]Stephen M Crotty, [3]Tamara Drucks, [4]Heiko A Schmidt, [5]Sebastian Burgstaller-Muehlbacher, [6]Arndt von Haeseler [Full author list] | Molecular Biology and Evolution [curation] | DOI: 10.1093/MOLBEV/MSAA164
PubMed: 32637998 | | 2020-07-08 |
| A Large-scale Drug Repositioning Survey for SARS-CoV-2 Antivirals | [1]Laura Riva, [2]Shuofeng Yuan, [3]Xin Yin, [4]Laura Martin-Sancho, [5]Naoko Matsunaga, [6]Sebastian Burgstaller-Muehlbacher, [7]Lars Pache, [8]Paul P De Jesus, [9]Mitchell V Hull, [10]Max W Chang, ... [Full author list] | | DOI: 10.1101/2020.04.16.044016
PubMed: 32511357 | drug repositioning [curation]; SARS-CoV-2 [curation] | 2020-04-18 |
| Wikidata as a knowledge graph for the life sciences | [1]Andra Waagmeester, [2]Gregory Stupp, [3]Sebastian Burgstaller-Muehlbacher, [4]Benjamin M. Good, [5]Malachi Griffith, [6]Obi Griffith, [7]Kristina Hanspers, [8]Henning Hermjakob, [9]Toby Hudson, [10]Kevin Hybiske, ... [Full author list] | eLife [curation] | DOI: 10.7554/ELIFE.52614
PubMed: 32180547 | biology [curation]; Wikidata [curation]; ontology [curation]; life sciences [curation]; semantic interoperability [curation]; FAIR data [curation]; knowledge graph [curation]; knowledge graph of science [curation] | 2020-03-17 |
| Author response: Wikidata as a knowledge graph for the life sciences | [1]Andra Waagmeester, [2]Gregory Stupp, [3]Sebastian Burgstaller-Muehlbacher, [4]Benjamin M. Good, [5]Malachi Griffith, [6]Obi Griffith, [7]Kristina Hanspers, [8]Henning Hermjakob, [9]Toby Hudson, [10]Kevin Hybiske, ... [Full author list] | eLife [curation] | DOI: 10.7554/ELIFE.52614.SA2
| Wikidata [curation]; life sciences [curation] | 2020-01-24 |
| Wikidata as a FAIR knowledge graph for the life sciences | [1]Andra Waagmeester, [2]Gregory Stupp, [3]Sebastian Burgstaller-Muehlbacher, [4]Benjamin M. Good, [5]Malachi Griffith, [6]Obi Griffith, [7]Kristina Hanspers, [8]Henning Hermjakob, [9]Toby Hudson, [10]Kevin Hybiske, ... [Full author list] | | DOI: 10.1101/799684
| Wikidata [curation]; life sciences [curation]; knowledge graph [curation]; knowledge graph of science [curation] | 2019-10-21 |
| exRNA Atlas Analysis Reveals Distinct Extracellular RNA Cargo Types and Their Carriers Present across Human Biofluids | [1]Oscar D Murillo, [2]William Thistlethwaite, [3]Joel Rozowsky, [4]Sai Lakshmi Subramanian, [5]Rocco Lucero, [6]Neethu Shah, [7]Andrew R Jackson, [8]Srimeenakshi Srinivasan, [9]Allen Chung, [10]Clara D Laurent, ..., [16]Kristina Hanspers, [17]Anders Riutta, [18]Sebastian Burgstaller-Muehlbacher, [19]Ravi V Shah, [20]Ashish Yeri, ... [Full author list] | Cell [curation] | DOI: 10.1016/J.CELL.2019.02.018
PubMed: 30951672 | RNA analysis [curation] | 2019-04-01 |
| The ReFRAME library as a comprehensive drug repurposing library and its application to the treatment of cryptosporidiosis | [1]Jeff Janes, [2]Megan E Young, [3]Emily Chen, [4]Nicole H Rogers, [5]Sebastian Burgstaller-Muehlbacher, [6]Laura D Hughes, [7]Melissa S Love, [8]Mitchell V Hull, [9]Kelli L Kuhen, [10]Ashley K Woods, [11]Sean B Joseph, [12]H Michael Petrassi, [13]Case W McNamara, [14]Matthew S Tremblay, [15]Andrew I. Su, [16]Peter G. Schultz, [17]Arnab K Chatterjee [Full author list] | Proceedings of the National Academy of Sciences of the United States of America [curation] | DOI: 10.1073/PNAS.1810137115
PubMed: 30282735 | Cryptosporidium [curation]; cryptosporidiosis [curation]; drug discovery [curation]; drug repositioning [curation]; phenotypic screening [curation]; Neglected tropical diseases [curation] | 2018-10-03 |
| WikiGenomes: an open web application for community consumption and curation of gene annotation data in Wikidata | [1]Timothy Elliott Putman, [2]Sebastien Lelong, [3]Sebastian Burgstaller-Muehlbacher, [4]Andra Waagmeester, [5]Colin Diesh, [6]Nathan Dunn, [7]Monica Munoz-Torres, [8]Gregory Stupp, [9]Chunlei Wu, [10]Andrew I. Su, [11]Benjamin M. Good [Full author list] | Database [curation] | DOI: 10.1101/102046
PubMed: 28365742 | Wikidata [curation]; data curation [curation]; WikiGenomes [curation]; community curation [curation] | 2017-03-08 |
| Linking Wikidata to the Rest of the Semantic Web | [1]Andra Waagmeester, [2]Egon Willighagen, [3]Núria Queralt Rosinach, [4]Elvira Mitraka, [5]Sebastian Burgstaller-Muehlbacher, [6]Timothy Elliott Putman, [7]Julia Turner, [8]Lynn Schriml, [9]Paul Pavlidis, [10]Andrew I. Su, [11]Benjamin M. Good [Full author list] | Proceedings of the 9th International Conference Semantic Web Applications and Tools for Life Sciences [curation] | | Wikidata [curation]; Semantic Web [curation]; SPARQL [curation] | 2017-02-19 |
| Opportunities and challenges presented by Wikidata in the context of biocuration | [1]Benjamin M. Good, [2]Sebastian Burgstaller-Muehlbacher, [3]Elvira Mitraka, [3-Q22990398]Timothy Elliott Putman, [4]Andrew I. Su, [5]Andra Waagmeester [Full author list] | Proceedings of the Joint International Conference on Biological Ontology and BioCreative [curation] | | Wikidata [curation]; bioinformatics [curation]; biocuration [curation] | 2016-11-29 |
| Human Determinants and the Role of Melanocortin-1 Receptor Variants in Melanoma Risk Independent of UV Radiation Exposure | [1]Judith Wendt, [2]Sabine Rauscher, [3]Sebastian Burgstaller-Muehlbacher, [4]Ingrid Fae, [5]Gottfried Fischer, [6]Hubert Pehamberger, [7]Ichiro Okamoto [Full author list] | JAMA Dermatology [curation] | DOI: 10.1001/JAMADERMATOL.2016.0050
PubMed: 27050141 | | 2016-04-06 |
| Wikidata: A platform for data integration and dissemination for the life sciences and beyond | [1]Elvira Mitraka, [2]Andra Waagmeester, [3]Sebastian Burgstaller-Muehlbacher, [4]Lynn Schriml, [4-Q28913673]Lynn Schriml, [5]Andrew I. Su, [6]Benjamin M. Good [Full author list] | Proceedings of the 8th International Conference on Semantic Web Applications and Tools for Life Sciences [curation] | DOI: 10.1101/031971
| Wikidata [curation]; Semantic Web [curation]; data integration [curation]; life sciences [curation] | 2016-01-31 |
| Characterization of patients at high risk of melanoma in Austria | [1]Christoph Müller, [2]J Wendt, [3]S Rauscher, [4]Sebastian Burgstaller-Muehlbacher, [5]Raute Sunder-Plassmann, [6]C Scheurecker, [7]E Richtig, [8]I Fae, [9]G Fischer, [10]H Pehamberger, [11]I Okamoto [Full author list] | British Journal of Dermatology [curation] | DOI: 10.1111/BJD.14407
PubMed: 26800492 | Austria [curation] | 2016-01-22 |
| Wikidata as a semantic framework for the Gene Wiki initiative | [1]Sebastian Burgstaller-Muehlbacher, [2]Andra Waagmeester, [3]Elvira Mitraka, [4]Julia Turner, [5]Timothy Elliott Putman, [6]Justin Leong, [7]Chinmay Naik, [8]Paul Pavlidis, [9]Lynn Schriml, [10]Benjamin M. Good, [11]Andrew I. Su [Full author list] | Database [curation] | DOI: 10.1093/DATABASE/BAW015
PubMed: 26989148 | Wikidata [curation]; Semantic Web [curation]; SPARQL [curation]; Gene Wiki [curation] | 2016-01-01 |
| Wikidata as a semantic framework for the Gene Wiki initiative | [1]Sebastian Burgstaller-Muehlbacher, [2]Andra Waagmeester, [3]Elvira Mitraka, [4]Julia Turner, [5]Timothy Elliott Putman, [6]Justin Leong, [7]Paul Pavlidis, [8]Lynn Schriml, [9]Benjamin M. Good, [10]Andrew I. Su [Full author list] | | DOI: 10.1101/032144
| Wikidata [curation]; Gene Wiki [curation] | 2015-11-18 |
| Centralizing content and distributing labor: a community model for curating the very long tail of microbial genomes | [1]Timothy Elliott Putman, [2]Sebastian Burgstaller-Muehlbacher, [3]Andra Waagmeester, [4]Chunlei Wu, [5]Andrew I. Su, [6]Benjamin M. Good [Full author list] | Database [curation] | DOI: 10.1101/031286
PubMed: 27022157 | Wikidata [curation]; microorganism [curation]; SPARQL [curation]; bioinformatics [curation]; community curation [curation] | 2015-11-12 |
| Novel CDKN2A mutations in Austrian melanoma patients | [1]Sebastian Burgstaller-Muehlbacher, [2]Martha Marko, [3]Christoph Müller, [4]Judith Wendt, [5]Hubert Pehamberger, [6]Ichiro Okamoto [Full author list] | Melanoma Research [curation] | DOI: 10.1097/CMR.0000000000000179
PubMed: 26225579 | | 2015-07-29 |
| NRAS and BRAF mutations in melanoma-associated nevi and uninvolved nevi | [1]Philipp Tschandl, [2]Anna S Berghoff, [3]Matthias Preusser, [4]Sebastian Burgstaller-Muehlbacher, [5]Hubert Pehamberger, [6]Ichiro Okamoto, [7]Harald Kittler [Full author list] | PLOS One [curation] | DOI: 10.1371/JOURNAL.PONE.0069639
PubMed: 23861977 | | 2013-07-08 |
| Proximal human FOXP3 promoter transactivated by NF-kappaB and negatively controlled by feedback loop and SP3 | [1]Paul Eckerstorfer, [2]Michael Novy, [3]Sebastian Burgstaller-Muehlbacher, [4]Wolfgang Paster, [5]Herbert B Schiller, [6]Herbert Mayer, [7]Hannes Stockinger [Full author list] | Molecular Immunology [curation] | DOI: 10.1016/J.MOLIMM.2010.04.002
PubMed: 20462637 | NF-κB [curation] | 2010-05-11 |