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Daniel Sobral

Wikidata Item | Scholia Profile [curation] | Reasonator | SQID

Listed Publications

19 publications found

TitleAuthors (identified)Published InIdentifier(s)TopicPublished Date
Phylogenomic characterization and signs of microevolution in the 2022 multi-country outbreak of monkeypox virus[1]Joana Isidro, [2]Vítor Borges, [3]Miguel Pinto, [4]Daniel Sobral, [5]João Dourado Santos, [6]Alexandra Nunes, [7]Verónica Mixão, [8]Rita Ferreira, [9]Daniela Santos, [10]Silvia Duarte, [11]Luís Vieira, [12]Maria José Borrego, [13]Maria Sofia Núncio, [14]Isabel Lopes de Carvalho, [15]Ana Pelerito, [16]Rita Cordeiro, [17]João Paulo Gomes [Full author list]Nature Medicine [curation]DOI: 10.1038/S41591-022-01907-Y
monkeypox virus [curation]2022-06-24
CorkOakDB-The Cork Oak Genome Database Portal[1]Cirenia Arias-Baldrich, [2]Marta Contreiras Silva, [3]Filippo Bergeretti, [4]Inês Chaves, [5]Célia Miguel, [6]Nelson J M Saibo, [7]Daniel Sobral, [8]Daniel Faria, [9]Pedro M Barros [Full author list]Database [curation]DOI: 10.1093/DATABASE/BAAA114
PubMed: 33382885		2020-12-01
A Tgfbr1/Snai1-dependent developmental module at the core of vertebrate axial elongation[1]André Dias, [2]Anastasiia Lozovska, [3]Filip J Wymeersch, [4]Ana Nóvoa, [5]Anahí Binagui-Casas, [6]Daniel Sobral, [7]Gabriel G. Martins, [8]Valerie Wilson, [9]Moisés Mallo [Full author list]eLife [curation]DOI: 10.7554/ELIFE.56615
PubMed: 32597756		2020-06-29
Phellem versus xylem: genome-wide transcriptomic analysis reveals novel regulators of cork formation in cork oak[1]Susana T Lopes, [2]Daniel Sobral, [3]Bruno Costa, [4]Pedro Perdiguero, [5]Inês Chaves, [6]Augusta Costa, [7]Célia Miguel [Full author list]Tree Physiology [curation]DOI: 10.1093/TREEPHYS/TPZ118
PubMed: 31860724		xylem [curation]2020-02-01
Integrative Transcriptome and Proteome Analysis of the Tube Foot and Adhesive Secretions of the Sea Urchin Paracentrotus lividus[1]Robert Pjeta, [2]Herbert H Lindner, [3]Leopold Kremser, [4]Willi Salvenmoser, [5]Daniel Sobral, [6]Peter Ladurner, [7]R. Santos [Full author list]International Journal of Molecular Sciences [curation]DOI: 10.3390/IJMS21030946
PubMed: 32023883		Paracentrotus lividus [curation]2020-01-31
Temporary adhesion of the proseriate flatworm Minona ileanae[1]Robert Pjeta, [2]Julia Wunderer, [3]Philip Bertemes, [4]Teresa Hofer, [5]Willi Salvenmoser, [6]Birgit Lengerer, [7]Stefan Coassin, [8]Gertraud Erhart, [9]Christian Beisel, [10]Daniel Sobral, [11]Leopold Kremser, [12]Herbert H Lindner, [13]Marco Curini-Galletti, [14]Claus-Peter Stelzer, [15]Michael W. Hess, [16]Peter Ladurner [Full author list]Philosophical Transactions of the Royal Society B [curation]DOI: 10.1098/RSTB.2019.0194
PubMed: 31495318		2019-09-09
High-Throughput Protein Production Combined with High- Throughput SELEX Identifies an Extensive Atlas of Ciona robusta Transcription Factor DNA-Binding Specificities[1]Kazuhiro R Nitta, [2]Renaud Vincentelli, [3]Edwin Jacox, [4]Agnès Cimino, [5]Yukio Ohtsuka, [6]Daniel Sobral, [7]Yutaka Satou, [8]Christian Cambillau, [9]Patrick Lemaire [Full author list]Methods in Molecular Biology [curation]DOI: 10.1007/978-1-4939-9624-7_23
PubMed: 31267468		Ciona robusta [curation]2019-01-01
time-ChIP: A Method to Determine Long-Term Locus-Specific Nucleosome Inheritance[1]Wojciech Siwek, [2]Mariluz Gómez-Rodríguez, [3]Daniel Sobral, [4]Ivan R Correa, [5]Lars Jansen [Full author list]Methods in Molecular Biology [curation]DOI: 10.1007/978-1-4939-8663-7_7
PubMed: 30073525		2018-01-01
iRAGu: A Novel Inducible and Reversible Mouse Model for Ubiquitous Recombinase Activity[1]Marie Bonnet, [2]Leonor Morais Sarmento, [3]Ana C Martins, [4]Daniel Sobral, [5]Joana Silva, [6]Jocelyne Demengeot [Full author list]Frontiers in Immunology [curation]DOI: 10.3389/FIMMU.2017.01525
PubMed: 29176980		2017-11-10
Ensembl regulation resources[1]Daniel R Zerbino, [2]Nathan Johnson, [3]Thomas Juetteman, [4]Dan Sheppard, [5]Steven P Wilder, [6]Ilias Lavidas, [7]Michael Nuhn, [8]Emily Pritchard, [9]Quentin Raffaillac-Desfosses, [10]Daniel Sobral, [11]Damian Keefe, [12]Stefan Gräf, ... [Full author list]Database [curation]DOI: 10.1093/DATABASE/BAV119
PubMed: 26888907		2016-02-17
A pipeline for the systematic identification of non-redundant full-ORF cDNAs for polymorphic and evolutionary divergent genomes: Application to the ascidian Ciona intestinalis[1]Michael J Gilchrist, [2]Daniel Sobral, [3]Pierre Khoueiry, [4]Fabrice Daian, [5]Batiste Laporte, [6]Ilya Patrushev, [7]Jun Matsumoto, [8]Ken Dewar, [9]Kenneth E M Hastings, [10]Yutaka Satou, [11]Patrick Lemaire, [12]Ute Rothbächer [Full author list]Developmental Biology [curation]DOI: 10.1016/J.YDBIO.2015.05.014
PubMed: 26025923		Ciona intestinalis [curation]2015-05-27
Staphylococcus aureus from 152 cases of bovine, ovine and caprine mastitis investigated by Multiple-locus variable number of tandem repeat analysis (MLVA)[1]Dominique Bergonier, [2]Daniel Sobral, [3]Andrea T. Feßler, [4]Eric Jacquet, [5]Florence B Gilbert, [6]Stefan Schwarz, [7]Michaël Treilles, [8]Philippe Bouloc, [9]Christine Pourcel, [10]Gilles Vergnaud [Full author list]Veterinary Research [curation]DOI: 10.1186/S13567-014-0097-4
PubMed: 25315988		Staphylococcus aureus [curation]; tandem repeat [curation]2014-10-02
The first steps of adaptation of Escherichia coli to the gut are dominated by soft sweeps[1]João Barroso-Batista, [2]Ana Sousa, [3]Ana Sousa, [4]Marta Lourenço, [5]Marie-Louise Bergman, [6]Daniel Sobral, [7]Jocelyne Demengeot, [8]Karina Xavier, [9]Isabel Gordo [Full author list]PLOS Genetics [curation]DOI: 10.1371/JOURNAL.PGEN.1004182
PubMed: 24603313		Escherichia coli [curation]2014-03-01
Ensembl 2013[1]Paul Flicek, [2]Ikhlak Ahmed, [3]M Ridwan Amode, [4]Daniel Barrell, [5]Kathryn Beal, [6]Simon Brent, [7]Denise Carvalho-Silva, [8]Peter Clapham, [9]Guy Coates, [10]Susan Fairley, ..., [34]Michael Schuster, [35]Daniel J Sheppard, [36]Daniel Sobral, [37]Kieron Taylor, [38]Anja Thormann, ... [Full author list]Nucleic Acids Research [curation]DOI: 10.1093/NAR/GKS1236
PubMed: 23203987		2013-01-01
High throughput multiple locus variable number of tandem repeat analysis (MLVA) of Staphylococcus aureus from human, animal and food sources[1]Daniel Sobral, [2]Stefan Schwarz, [3]Dominique Bergonier, [4]Anne Brisabois, [5]Andrea T. Feßler, [6]Florence B Gilbert, [7]Kristina Kadlec, [8]Benoit Lebeau, [9]Fabienne Loisy-Hamon, [10]Michaël Treilles, [11]Christine Pourcel, [12]Gilles Vergnaud [Full author list]PLOS One [curation]DOI: 10.1371/JOURNAL.PONE.0033967
PubMed: 22567085		Staphylococcus aureus [curation]; tandem repeat [curation]2012-01-01
Ensembl 2012[1]Paul Flicek, [2]M Ridwan Amode, ..., [3]Daniel Barrell, [4]Kathryn Beal, [5]Simon Brent, [7]Peter Clapham, [8]Guy Coates, [9]Susan Fairley, [10]Stephen Fitzgerald, ..., [33]Michael Schuster, [34]Daniel Sobral, [35]Y Amy Tang, ... [Full author list]Nucleic Acids Research [curation]DOI: 10.1093/NAR/GKR991
PubMed: 22086963		2012-01-01
Imaging of fixed ciona embryos for creating 3D digital replicas[1]Francois B Robin, [2]Delphine Dauga, [3]Olivier Tassy, [4]Daniel Sobral, [5]Fabrice Daian, [6]Patrick Lemaire [Full author list]Cold Spring Harbor Protocols [curation]DOI: 10.1101/PDB.PROT065854
PubMed: 21969624		2011-10-01
Ensembl 2011[1]Paul Flicek, [2]M Ridwan Amode, [3]Daniel Barrell, [4]Kathryn Beal, [5]Simon Brent, [6]Yuan Chen, [7]Peter Clapham, [8]Guy Coates, [9]Susan Fairley, [10]Stephen Fitzgerald, ..., [29]Magali Ruffier, [30]Michael Schuster, [31]Daniel Sobral, [32]Giulietta Spudich, [33]Y Amy Tang, ... [Full author list]Nucleic Acids Research [curation]DOI: 10.1093/NAR/GKQ1064
PubMed: 21045057		2011-01-01
The ANISEED database: digital representation, formalization, and elucidation of a chordate developmental program[1]Olivier Tassy, [2]Delphine Dauga, [3]Fabrice Daian, [4]Daniel Sobral, [5]Francois B Robin, [6]Pierre Khoueiry, [7]David Salgado, [8]Vanessa Fox, [9]Danièle Caillol, [10]Renaud Schiappa, ... [Full author list]Genome Research [curation]DOI: 10.1101/GR.108175.110
PubMed: 20647237		database [curation]2010-07-20
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